Literature DB >> 12398681

Intermittent permeation of cylindrical nanopores by water.

Rosalind Allen1, Simone Melchionna, Jean-Pierre Hansen.   

Abstract

Molecular-dynamics simulations of water molecules in nanometer sized cylindrical channels connecting two reservoirs show that the permeation of water is very sensitive to the channel radius and to electric polarization of the embedding material. At threshold, the permeation is intermittent on a nanosecond time scale, and strongly enhanced by the presence of an ion inside the channel, providing a possible mechanism for gating. Confined water remains surprisingly fluid and bulklike. Its behavior differs strikingly from that of a reference Lennard-Jones fluid, which tends to contract into a highly layered structure inside the channel.

Entities:  

Year:  2002        PMID: 12398681     DOI: 10.1103/PhysRevLett.89.175502

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  26 in total

1.  The implementation of slab geometry for membrane-channel molecular dynamics simulations.

Authors:  David Bostick; Max L Berkowitz
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

2.  Osmotic water transport through carbon nanotube membranes.

Authors:  Amrit Kalra; Shekhar Garde; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-23       Impact factor: 11.205

3.  Nanopores: water flow at the flip of a switch.

Authors:  Ulrich Rant
Journal:  Nat Nanotechnol       Date:  2011-12-06       Impact factor: 39.213

4.  Protons may leak through pure lipid bilayers via a concerted mechanism.

Authors:  Harald L Tepper; Gregory A Voth
Journal:  Biophys J       Date:  2005-02-04       Impact factor: 4.033

5.  Ion transport through membrane-spanning nanopores studied by molecular dynamics simulations and continuum electrostatics calculations.

Authors:  Christine Peter; Gerhard Hummer
Journal:  Biophys J       Date:  2005-07-08       Impact factor: 4.033

6.  Toward theoretical analysis of long-range proton transfer kinetics in biomolecular pumps.

Authors:  P H König; N Ghosh; M Hoffmann; M Elstner; E Tajkhorshid; Th Frauenheim; Q Cui
Journal:  J Phys Chem A       Date:  2006-01-19       Impact factor: 2.781

7.  The dewetting transition and the hydrophobic effect.

Authors:  Niharendu Choudhury; B Montgomery Pettitt
Journal:  J Am Chem Soc       Date:  2007-03-27       Impact factor: 15.419

8.  Bubbles, gating, and anesthetics in ion channels.

Authors:  Roland Roth; Dirk Gillespie; Wolfgang Nonner; Robert E Eisenberg
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

9.  Determinants of water permeability through nanoscopic hydrophilic channels.

Authors:  Guillem Portella; Bert L de Groot
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

10.  Remarkable patterns of surface water ordering around polarized buckminsterfullerene.

Authors:  Gaurav Chopra; Michael Levitt
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-15       Impact factor: 11.205

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