Literature DB >> 12398641

Trapping of DNA by thermophoretic depletion and convection.

Dieter Braun1, Albert Libchaber.   

Abstract

Thermophoresis depletes DNA from a heated spot. We quantify for the first time the thermal diffusion constant D(T)=0.4x10(-8) cm(2)/s K for DNA, using fluorescent dyes and laser heating. For 5 kB DNA we extrapolate a 1000-fold depletion from a temperature difference of 50 K. Surprisingly, convection generated by the same heating can turn the depletion into trapping of DNA. Trapped DNA can form point geometries 20 microm in diameter with more than 1000-fold enhanced concentrations. The accumulation is driven only by temperature gradients and offers a new approach to biological microfluidics and replicating systems in prebiotic evolution.

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Year:  2002        PMID: 12398641     DOI: 10.1103/PhysRevLett.89.188103

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  47 in total

1.  Protein-binding assays in biological liquids using microscale thermophoresis.

Authors:  Christoph J Wienken; Philipp Baaske; Ulrich Rothbauer; Dieter Braun; Stefan Duhr
Journal:  Nat Commun       Date:  2010-10-19       Impact factor: 14.919

2.  Particle thermophoresis in liquids.

Authors:  A Parola; R Piazza
Journal:  Eur Phys J E Soft Matter       Date:  2004-11-16       Impact factor: 1.890

3.  Thermophoresis of DNA determined by microfluidic fluorescence.

Authors:  S Duhr; S Arduini; D Braun
Journal:  Eur Phys J E Soft Matter       Date:  2004-11-17       Impact factor: 1.890

4.  Temperature control methods in a laser tweezers system.

Authors:  Hanbin Mao; J Ricardo Arias-Gonzalez; Steven B Smith; Ignacio Tinoco; Carlos Bustamante
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

5.  Why molecules move along a temperature gradient.

Authors:  Stefan Duhr; Dieter Braun
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

6.  Coupled transport at the nanoscale: the unreasonable effectiveness of equilibrium theory.

Authors:  R Dean Astumian
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-26       Impact factor: 11.205

7.  Extreme accumulation of nucleotides in simulated hydrothermal pore systems.

Authors:  Philipp Baaske; Franz M Weinert; Stefan Duhr; Kono H Lemke; Michael J Russell; Dieter Braun
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-09       Impact factor: 11.205

8.  Light-induced dielectrophoretic manipulation of DNA.

Authors:  Marco Hoeb; Joachim O Rädler; Stefan Klein; Martin Stutzmann; Martin S Brandt
Journal:  Biophys J       Date:  2007-05-04       Impact factor: 4.033

9.  Real-Time Infrared Overtone Laser Control of Temperature in Picoliter H(2)O Samples: "Nanobathtubs" for Single Molecule Microscopy.

Authors:  Erik D Holmstrom; David J Nesbitt
Journal:  J Phys Chem Lett       Date:  2010       Impact factor: 6.475

Review 10.  Optothermal Manipulations of Colloidal Particles and Living Cells.

Authors:  Linhan Lin; Eric H Hill; Xiaolei Peng; Yuebing Zheng
Journal:  Acc Chem Res       Date:  2018-05-25       Impact factor: 22.384

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