Literature DB >> 12397183

Origin of plant glycerol transporters by horizontal gene transfer and functional recruitment.

Rafael Zardoya1, Xiaodong Ding, Yoshichika Kitagawa, Maarten J Chrispeels.   

Abstract

Gene-family evolution mostly relies on gene duplication coupled with functional diversification of gene products. However, other evolutionary mechanisms may also be important in generating protein diversity. The ubiquitous membrane intrinsic protein (MIP) gene family is an excellent model system to search for such alternative evolutionary mechanisms. MIPs are proteins that transport water, glycerol, and small solutes across cell membranes in all living organisms. We reconstructed the molecular phylogeny of MIPs based on amino acid sequence data by using neighbor-joining, maximum-likelihood, and Bayesian methods of phylogenetic inference. The recovered trees show an early and distinct separation of water and glycerol transporters, i.e., aquaporins (AQPs), and aquaglyceroporins. The latter are absent from plants. As expected, gene duplication and functional diversification account for most of the diversity of animal and plant members of the family. However, in contrast to this model, we find that the sister group of plant glycerol transporters are bacterial AQPs. This relationship suggests first that plant glycerol transporters may resulted from a single event of horizontal gene transfer from bacteria, which we have estimated to have occurred approximately 1,200 million years ago, at the origin of plants, and second that bacterial AQPs were likely recruited to transport glycerol in plants because of their absence of aquaglyceroporins. This striking example of adaptive evolution at the molecular level was demonstrated further by finding convergent or parallel replacements at particular amino acid positions related to water- and glycerol-transporting specificity.

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Year:  2002        PMID: 12397183      PMCID: PMC137515          DOI: 10.1073/pnas.192573799

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

Review 1.  Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions.

Authors:  A Meyer; M Schartl
Journal:  Curr Opin Cell Biol       Date:  1999-12       Impact factor: 8.382

2.  Structural clues in the sequences of the aquaporins.

Authors:  J B Heymann; A Engel
Journal:  J Mol Biol       Date:  2000-01-28       Impact factor: 5.469

Review 3.  The role of aquaporins in cellular and whole plant water balance.

Authors:  I Johansson; M Karlsson; U Johanson; C Larsson; P Kjellbom
Journal:  Biochim Biophys Acta       Date:  2000-05-01

4.  A phylogenetic framework for the aquaporin family in eukaryotes.

Authors:  R Zardoya; S Villalba
Journal:  J Mol Evol       Date:  2001-05       Impact factor: 2.395

5.  Aquaporins: Phylogeny, Structure, and Physiology of Water Channels.

Authors:  J. Bernard Heymann; Andreas Engel
Journal:  News Physiol Sci       Date:  1999-10

6.  The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants.

Authors:  U Johanson; M Karlsson; I Johansson; S Gustavsson; S Sjövall; L Fraysse; A R Weig; P Kjellbom
Journal:  Plant Physiol       Date:  2001-08       Impact factor: 8.340

7.  Functional identification of the glycerol permease activity of Arabidopsis thaliana NLM1 and NLM2 proteins by heterologous expression in Saccharomyces cerevisiae.

Authors:  A R Weig; C Jakob
Journal:  FEBS Lett       Date:  2000-09-22       Impact factor: 4.124

8.  Structural determinants of water permeation through aquaporin-1.

Authors:  K Murata; K Mitsuoka; T Hirai; T Walz; P Agre; J B Heymann; A Engel; Y Fujiyoshi
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

9.  Structure of a glycerol-conducting channel and the basis for its selectivity.

Authors:  D Fu; A Libson; L J Miercke; C Weitzman; P Nollert; J Krucinski; R M Stroud
Journal:  Science       Date:  2000-10-20       Impact factor: 47.728

10.  Switch from an aquaporin to a glycerol channel by two amino acids substitution.

Authors:  V Lagrée; A Froger; S Deschamps; J F Hubert; C Delamarche; G Bonnec; D Thomas; J Gouranton; I Pellerin
Journal:  J Biol Chem       Date:  1999-03-12       Impact factor: 5.157

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  22 in total

1.  A novel plant major intrinsic protein in Physcomitrella patens most similar to bacterial glycerol channels.

Authors:  Sofia Gustavsson; Anne-Sophie Lebrun; Kristina Nordén; François Chaumont; Urban Johanson
Journal:  Plant Physiol       Date:  2005-08-19       Impact factor: 8.340

2.  The frequency of eubacterium-to-eukaryote lateral gene transfers shows significant cross-taxa variation within amoebozoa.

Authors:  Russell F Watkins; Michael W Gray
Journal:  J Mol Evol       Date:  2006-11-02       Impact factor: 2.395

Review 3.  Prediction of aquaporin function by integrating evolutionary and functional analyses.

Authors:  Juliana Perez Di Giorgio; Gabriela Soto; Karina Alleva; Cintia Jozefkowicz; Gabriela Amodeo; Jorge Prometeo Muschietti; Nicolás Daniel Ayub
Journal:  J Membr Biol       Date:  2013-11-29       Impact factor: 1.843

4.  Arabidopsis POLYOL TRANSPORTER5, a new member of the monosaccharide transporter-like superfamily, mediates H+-Symport of numerous substrates, including myo-inositol, glycerol, and ribose.

Authors:  Yvonne-Simone Klepek; Dietmar Geiger; Ruth Stadler; Franz Klebl; Lucie Landouar-Arsivaud; Rémi Lemoine; Rainer Hedrich; Norbert Sauer
Journal:  Plant Cell       Date:  2004-12-14       Impact factor: 11.277

5.  A family of diatom-like silicon transporters in the siliceous loricate choanoflagellates.

Authors:  Alan O Marron; Mark J Alston; Darren Heavens; Michael Akam; Mario Caccamo; Peter W H Holland; Giselle Walker
Journal:  Proc Biol Sci       Date:  2013-02-13       Impact factor: 5.349

6.  Four hundred million years of silica biomineralization in land plants.

Authors:  Elizabeth Trembath-Reichert; Jonathan Paul Wilson; Shawn E McGlynn; Woodward W Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 11.205

7.  The zebrafish genome encodes the largest vertebrate repertoire of functional aquaporins with dual paralogy and substrate specificities similar to mammals.

Authors:  Angèle Tingaud-Sequeira; Magdalena Calusinska; Roderick N Finn; François Chauvigné; Juanjo Lozano; Joan Cerdà
Journal:  BMC Evol Biol       Date:  2010-02-11       Impact factor: 3.260

8.  The Hevea brasiliensis XIP aquaporin subfamily: genomic, structural and functional characterizations with relevance to intensive latex harvesting.

Authors:  David Lopez; Maroua Ben Amira; Daniel Brown; Beatriz Muries; Nicole Brunel-Michac; Sylvain Bourgerie; Benoit Porcheron; Remi Lemoine; Hervé Chrestin; Ewan Mollison; Alessandra Di Cola; Lorenzo Frigerio; Jean-Louis Julien; Aurélie Gousset-Dupont; Boris Fumanal; Philippe Label; Valérie Pujade-Renaud; Daniel Auguin; Jean-Stéphane Venisse
Journal:  Plant Mol Biol       Date:  2016-04-11       Impact factor: 4.076

Review 9.  Salinity tolerance in barley during germination- homologs and potential genes.

Authors:  Edward Mwando; Tefera Tolera Angessa; Yong Han; Chengdao Li
Journal:  J Zhejiang Univ Sci B       Date:  2020-02-05       Impact factor: 3.066

10.  Divergence in function and expression of the NOD26-like intrinsic proteins in plants.

Authors:  Qingpo Liu; Huasen Wang; Zhonghua Zhang; Jiasheng Wu; Ying Feng; Zhujun Zhu
Journal:  BMC Genomics       Date:  2009-07-15       Impact factor: 3.969

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