Literature DB >> 12381324

The effect of salts on the activity and stability of Escherichia coli and Haloferax volcanii dihydrofolate reductases.

Donna B Wright1, Douglas D Banks, Jeremy R Lohman, Jacqueline L Hilsenbeck, Lisa M Gloss.   

Abstract

The extremely halophilic Archae require near-saturating concentrations of salt in the external environment and in their cytoplasm, potassium being the predominant intracellular cation. The proteins of these organisms have evolved to function in concentrations of salt that inactivate or precipitate homologous proteins from non-halophilic species. It has been proposed that haloadaptation is primarily due to clustering of acidic residues on the surface of the protein, and that these clusters bind networks of hydrated ions. The dihydrofolate reductases from Escherichia coli (ecDHFR) and two DHFR isozymes from Haloferax volcanii (hvDHFR1 and hvDHFR2) have been used as a model system to compare the effect of salts on a mesophilic and halophilic enzyme. The KCl-dependence of the activity and substrate affinity was investigated. ecDHFR is largely inactivated above 1M KCl, with no major effect on substrate affinity. hvDHFR1 and hvDHFR2 unfold at KCl concentrations below approximately 0.5M. Above approximately 1M, the KCl dependence of the hvDHFR activities can be attributed to the effect of salt on substrate affinity. The abilities of NaCl, KCl, and CsCl to enhance the stability to urea denaturation were determined, and similar efficacies of stabilization were observed for all three DHFR variants. The DeltaG degrees (H(2)O) values increased linearly with increasing KCl and CsCl concentrations. The increase of DeltaG degrees (H(2)O) as a function of the smallest cation, NaCl, is slightly curved, suggesting a minor stabilization from cation binding or screening of electrostatic repulsion. At their respective physiological ionic strengths, the DHFR variants exhibit similar stabilities. Salts stabilize ecDHFR and the hvDHFRs by a common mechanism, not a halophile-specific mechanism, such as the binding of hydrated salt networks. The primary mode of salt stabilization of the mesophilic and halophilic DHFRs appears to be through preferential hydration and the Hofmeister effect of salt on the activity and entropy of the aqueous solvent. In support of this conclusion, all three DHFRs are similarly stabilized by the non-ionic cosolute, sucrose.

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Year:  2002        PMID: 12381324     DOI: 10.1016/s0022-2836(02)00916-6

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  29 in total

1.  Comparative study on dihydrofolate reductases from Shewanella species living in deep-sea and ambient atmospheric-pressure environments.

Authors:  Chiho Murakami; Eiji Ohmae; Shin-ichi Tate; Kunihiko Gekko; Kaoru Nakasone; Chiaki Kato
Journal:  Extremophiles       Date:  2010-12-23       Impact factor: 2.395

2.  Structure in an extreme environment: NMR at high salt.

Authors:  Bulent Binbuga; Arezue F B Boroujerdi; John K Young
Journal:  Protein Sci       Date:  2007-08       Impact factor: 6.725

3.  1H, 13C and 15N backbone and side chain resonance assignments of Haloferax volcanii DHFR1.

Authors:  Bulent Binbuga; John K Young
Journal:  J Biomol NMR       Date:  2005-12       Impact factor: 2.835

4.  Effects of salt on the structure, stability, and function of a halophilic dihydrofolate reductase from a hyperhalophilic archaeon, Haloarcula japonica strain TR-1.

Authors:  Yurina Miyashita; Eiji Ohmae; Kaoru Nakasone; Katsuo Katayanagi
Journal:  Extremophiles       Date:  2015-01-24       Impact factor: 2.395

5.  Salt effects on the conformational stability of the visual G-protein-coupled receptor rhodopsin.

Authors:  Arfaxad Reyes-Alcaraz; Marlet Martínez-Archundia; Eva Ramon; Pere Garriga
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

6.  Halophilic mechanism of the enzymatic function of a moderately halophilic dihydrofolate reductase from Haloarcula japonica strain TR-1.

Authors:  Yurina Miyashita; Eiji Ohmae; Teikichi Ikura; Kaoru Nakasone; Katsuo Katayanagi
Journal:  Extremophiles       Date:  2017-03-27       Impact factor: 2.395

7.  L-Asparaginase Activity in Cell Lysates and Culture Media of Halophilic Bacterial Isolates.

Authors:  Mahmood Barati; Mohammad Ali Faramarzi; Nastaran Nafissi-Varcheh; Mohammad Reza Khoshayand; Mohammad Hassan Houshdar Tehrani; Hossein Vahidi; Sina Adrangi
Journal:  Iran J Pharm Res       Date:  2016       Impact factor: 1.696

8.  Purification and characterisation of two extremely halotolerant xylanases from a novel halophilic bacterium.

Authors:  Peter Langborg Wejse; Kjeld Ingvorsen; Kim Kusk Mortensen
Journal:  Extremophiles       Date:  2003-07-18       Impact factor: 2.395

9.  Salt-dependent studies of NADP-dependent isocitrate dehydrogenase from the halophilic archaeon Haloferax volcanii.

Authors:  Dominique Madern; Mónica Camacho; Adoración Rodríguez-Arnedo; María-José Bonete; Giuseppe Zaccai
Journal:  Extremophiles       Date:  2004-06-18       Impact factor: 2.395

10.  Structural basis for the aminoacid composition of proteins from halophilic archea.

Authors:  Xavier Tadeo; Blanca López-Méndez; Tamara Trigueros; Ana Laín; David Castaño; Oscar Millet
Journal:  PLoS Biol       Date:  2009-12-15       Impact factor: 8.029

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