Literature DB >> 12380832

Reusable platforms for high-throughput on-chip temperature gradient assays.

Hanbin Mao1, Matthew A Holden, Min You, Paul S Cremer.   

Abstract

This paper describes a reusable platform that can apply a linear temperature gradient to a lab-on-a-chip device. When a planar microfluidic device with a series of microchannels is placed on top of the platform with the channels perpendicular to the gradient, each channel is held at a discrete temperature. This allows temperature-dependent data for chemical or biochemical species flowed into the device to be obtained in a concurrent fashion. As a demonstration, a melting curve for dsDNA is performed by collecting all the data simultaneously. The gradient is stable enough to easily distinguish between 30-mers where the complement strand contains a single C-A mismatch or a single T-G mismatch or is a perfect match. On the other hand, a temperature gradient can be formed parallel to the direction of flow of the microchannels. This allows the temperature in each channel to vary continuously as the liquid flows downstream. If each microchannel in the array contains a distinct pH value, ionic strength, species concentration, or chemical composition, then a high-throughput two-variable experiment can be performed. We demonstrate this mode of data collection by measuring the fluorescence yield of fluorescein dye molecules in aqueous solution simultaneously as a function of concentration and temperature.

Entities:  

Year:  2002        PMID: 12380832     DOI: 10.1021/ac025851z

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  12 in total

1.  Temperature effects on DNA chip experiments from surface plasmon resonance imaging: isotherms and melting curves.

Authors:  J B Fiche; A Buhot; R Calemczuk; T Livache
Journal:  Biophys J       Date:  2006-11-03       Impact factor: 4.033

2.  Melting analysis on microbeads in rapid temperature-gradient inside microchannels for single nucleotide polymorphisms detection.

Authors:  Kan-Chien Li; Shih-Torng Ding; En-Chung Lin; Lon Alex Wang; Yen-Wen Lu
Journal:  Biomicrofluidics       Date:  2014-11-26       Impact factor: 2.800

3.  A stepwise mechanism for aqueous two-phase system formation in concentrated antibody solutions.

Authors:  Bradley A Rogers; Kelvin B Rembert; Matthew F Poyton; Halil I Okur; Amanda R Kale; Tinglu Yang; Jifeng Zhang; Paul S Cremer
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-23       Impact factor: 11.205

4.  Effects of Hofmeister anions on the phase transition temperature of elastin-like polypeptides.

Authors:  Younhee Cho; Yanjie Zhang; Trine Christensen; Laura B Sagle; Ashutosh Chilkoti; Paul S Cremer
Journal:  J Phys Chem B       Date:  2008-10-09       Impact factor: 2.991

5.  Hydrogen bonding of beta-turn structure is stabilized in D(2)O.

Authors:  Younhee Cho; Laura B Sagle; Satoshi Iimura; Yanjie Zhang; Jaibir Kherb; Ashutosh Chilkoti; J Martin Scholtz; Paul S Cremer
Journal:  J Am Chem Soc       Date:  2009-10-28       Impact factor: 15.419

6.  THE MELTING MECHANISM OF DNA TETHERED TO A SURFACE.

Authors:  Khawla Qamhieh; Ka-Yiu Wong; Gillian C Lynch; B Montgomery Pettitt
Journal:  Int J Numer Anal Model       Date:  2009-03-08       Impact factor: 1.398

7.  High-resolution temperature-concentration diagram of alpha-synuclein conformation obtained from a single Förster resonance energy transfer image in a microfluidic device.

Authors:  Virginia Vandelinder; Allan Chris M Ferreon; Yann Gambin; Ashok A Deniz; Alex Groisman
Journal:  Anal Chem       Date:  2009-08-15       Impact factor: 6.986

8.  Investigation of parameters that affect the success rate of microarray-based allele-specific hybridization assays.

Authors:  Lena Poulsen; Martin Jensen Søe; Lisbeth Birk Møller; Martin Dufva
Journal:  PLoS One       Date:  2011-03-22       Impact factor: 3.240

9.  Microfludic device for creating ionic strength gradients over DNA microarrays for efficient DNA melting studies and assay development.

Authors:  Jesper Petersen; Lena Poulsen; Henrik Birgens; Martin Dufva
Journal:  PLoS One       Date:  2009-03-11       Impact factor: 3.240

10.  Recent Progress in Lab-on-a-Chip Technology and Its Potential Application to Clinical Diagnoses.

Authors:  Nae Yoon Lee
Journal:  Int Neurourol J       Date:  2013-03-31       Impact factor: 2.835

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