Literature DB >> 12368717

Distribution of p53 codon 72 polymorphism in Indian primary open angle glaucoma patients.

Moulinath Acharya1, Sayan Mitra, Arijit Mukhopadhyay, Mita Khan, Susanta Roychoudhury, Kunal Ray.   

Abstract

PURPOSE: Glaucoma is a complex neurodegenerative disorder of the eye. Primary Open Angle Glaucoma (POAG) is the most common type, accounting for over half of the total cases. Recently, a significant difference in the distribution of the codon 72 polymorphism of the tumor suppressor gene p53 between control subjects and POAG patients of Chinese origin (p=0.00782) was demonstrated. The proline residue at codon 72 of the p53 gene was significantly over represented in the POAG patients relative to healthy controls. The purpose of this study was to investigate whether the reported association between the p53 polymorphism and POAG is a common phenomenon irrespective of geographical location or ethnicity of the population.
METHODS: Sixty seven unrelated POAG patients, ranging from 10-65 years of age (mean+/-SD of 41.16+/-18.52 years), and 112 control subjects having a similar age range of 18-63 years (mean+/-SD of 36.64+/-14.65 years) were enrolled in this study. A region of the p53 gene encompassing two polymorphic sites, a 16 bp duplication in intron 3 and a BstU I RFLP in exon 4, were amplified by polymerase chain reaction from Indian POAG patients and normal healthy controls. A single base change (G to C) in codon 72 alters the amino acid residue from arginine to proline and removes the polymorphic BstU I site mentioned above. The amplified DNA fragments were digested with the restriction enzyme and the digestion patterns of the fragments were used to identify the alleles for both the polymorphic sites.
RESULTS: No significant association between p53 alleles and Indian POAG patients were observed by analyzing either codon 72 polymorphism (p=0.5627) or the intronic 16 bp duplication polymorphism (p=0.059). Haplotype analysis, reported to be a better predictor of association of the p53 gene with different types of cancer, was also performed and no association of any haplotype was detected with POAG (p=0.1831).
CONCLUSIONS: Association between the p53 gene encoding for proline at codon 72 and POAG presumably exists in some ethnic populations but cannot be used as a predictor for the role of the gene as a common regulator of cell death of retinal ganglions leading to POAG.

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Year:  2002        PMID: 12368717

Source DB:  PubMed          Journal:  Mol Vis        ISSN: 1090-0535            Impact factor:   2.367


  12 in total

1.  WDR36 and P53 gene variants and susceptibility to primary open-angle glaucoma: analysis of gene-gene interactions.

Authors:  Cristina Blanco-Marchite; Francisco Sánchez-Sánchez; María-Pilar López-Garrido; Mercedes Iñigez-de-Onzoño; Francisco López-Martínez; Enrique López-Sánchez; Lydia Alvarez; Pedro-Pablo Rodríguez-Calvo; Carmen Méndez-Hernández; Luis Fernández-Vega; Julián García-Sánchez; Miguel Coca-Prados; Julián García-Feijoo; Julio Escribano
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-10-31       Impact factor: 4.799

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Authors:  Meenakshi Umar; Rohit Upadhyay; Rohini Khurana; Shaleen Kumar; Uday Chand Ghoshal; Balraj Mittal
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3.  The primary open-angle glaucoma gene WDR36 functions in ribosomal RNA processing and interacts with the p53 stress-response pathway.

Authors:  Jonathan M Skarie; Brian A Link
Journal:  Hum Mol Genet       Date:  2008-05-10       Impact factor: 6.150

Review 4.  Recent advances in molecular genetics of glaucoma.

Authors:  Kunal Ray; Arijit Mukhopadhyay; Moulinath Acharya
Journal:  Mol Cell Biochem       Date:  2003-11       Impact factor: 3.396

Review 5.  Complex genetic mechanisms in glaucoma: an overview.

Authors:  Kollu N Rao; Srujana Nagireddy; Subhabrata Chakrabarti
Journal:  Indian J Ophthalmol       Date:  2011-01       Impact factor: 1.848

6.  Association of polymorphisms in APOE, p53, and p21 with primary open-angle glaucoma in Turkish patients.

Authors:  E Saglar; D Yucel; B Bozkurt; R K Ozgul; M Irkec; A Ogus
Journal:  Mol Vis       Date:  2009-06-30       Impact factor: 2.367

7.  Primary open angle glaucoma in a Caucasian population is associated with the p53 codon 72 polymorphism.

Authors:  Christopher L Daugherty; Hilda Curtis; Tony Realini; Judie F Charlton; Sepideh Zareparsi
Journal:  Mol Vis       Date:  2009-09-22       Impact factor: 2.367

8.  Lack of association between p53 gene polymorphisms and primary open angle glaucoma in the Japanese population.

Authors:  Fumihiko Mabuchi; Yoichi Sakurada; Kenji Kashiwagi; Zentaro Yamagata; Hiroyuki Iijima; Shigeo Tsukahara
Journal:  Mol Vis       Date:  2009-05-20       Impact factor: 2.367

9.  The p53 codon 72 PRO/PRO genotype may be associated with initial central visual field defects in caucasians with primary open angle glaucoma.

Authors:  Janey L Wiggs; Alex W Hewitt; Bao Jian Fan; Dan Yi Wang; Dayse R Figueiredo Sena; Colm O'Brien; Anthony Realini; Jamie E Craig; David P Dimasi; David A Mackey; Jonathan L Haines; Louis R Pasquale
Journal:  PLoS One       Date:  2012-09-26       Impact factor: 3.240

10.  Different WDR36 mutation pattern in Chinese patients with primary open-angle glaucoma.

Authors:  Bao Jian Fan; Dan Yi Wang; Ching-Yu Cheng; Wendy Charles Ko; Shun Chiu Lam; Chi Pui Pang
Journal:  Mol Vis       Date:  2009-04-03       Impact factor: 2.367

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