Literature DB >> 12367656

Multicenter evaluation of the Bayer VERSANT HIV-1 RNA 3.0 assay: analytical and clinical performance.

Curt A Gleaves1, John Welle, Mary Campbell, Tarek Elbeik, Valerie Ng, Patricia E Taylor, Ken Kuramoto, Sherri Aceituno, Eva Lewalski, Barbara Joppa, Lynette Sawyer, Carl Schaper, Denise McNairn, Thomas Quinn.   

Abstract

BACKGROUND: The use of quantitative HIV-1 RNA assays is part of the standard of care for the management of HIV-1-infected individuals.
OBJECTIVE: The Bayer VERSANT HIV-1 RNA 3.0 Assay (bDNA) was evaluated for reproducibility, linearity, limits of detection and quantitation, effects of potentially interfering substances and conditions, effects of plasma collection and handling conditions, clinical sensitivity and specificity, and biologic variability. STUDY
DESIGN: Anti-HIV-1-positive specimens, patient specimens containing potentially interfering substances, and anti-HIV-negative specimens were collected from several HIV clinics, blood centers, or commercial companies across the United States. Specimen panels used to evaluate nonclinical performance of the assay were prepared at Bayer Diagnostics. Bayer Assay Development personnel performed 2 of the nonclinical studies-effect of freeze-thaw cycles using 'spiked' HIV-1 RNA-positive samples and effect of other disease organisms. All other studies were conducted at 7 external sites. In some of the studies performed, specimens were tested in parallel with the Roche AMPLICOR HIV-1 MONITOR version 1.0 PCR Test. RESULTS/
CONCLUSIONS: The results of these studies showed that the Bayer Assay has excellent reproducibility, a broad linear range (75-500,000 HIV-1 RNA copies/ml), throughput of 168 patient results per two-plate run in a 22-h period, and few limitations for use. Because this test is designed for use only in individuals who are known to be HIV-1-positive, the clinical specificity of 97.6% is adequate for its intended use. These characteristics make it an attractive method for general laboratory use of monitoring HIV-1-infected patients.

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Year:  2002        PMID: 12367656     DOI: 10.1016/s1386-6532(02)00011-2

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  22 in total

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Authors:  Ilesh V Jani; Jennifer Sabatier; Adolfo Vubil; Shambavi Subbarao; Dulce Bila; Amina de Sousa; Nédio Mabunda; Albert Garcia; Beth Skaggs; Dennis Ellenberger; Artur Ramos
Journal:  J Clin Microbiol       Date:  2012-01-25       Impact factor: 5.948

2.  Evaluation of the branched-chain DNA assay for measurement of RNA in formalin-fixed tissues.

Authors:  Beatrice S Knudsen; April N Allen; Dale F McLerran; Robert L Vessella; Jonathan Karademos; Joan E Davies; Botoul Maqsodi; Gary K McMaster; Alan R Kristal
Journal:  J Mol Diagn       Date:  2008-02-14       Impact factor: 5.568

Review 3.  The Diagnosis of HIV Infection in Infants and Children.

Authors:  Alireza Abdollahi; Hana Saffar
Journal:  Iran J Pathol       Date:  2016

4.  Impact of human immunodeficiency virus type 1 (HIV-1) genetic diversity on performance of four commercial viral load assays: LCx HIV RNA Quantitative, AMPLICOR HIV-1 MONITOR v1.5, VERSANT HIV-1 RNA 3.0, and NucliSens HIV-1 QT.

Authors:  Priscilla Swanson; Carmen de Mendoza; Yagnya Joshi; Alan Golden; Richard L Hodinka; Vincent Soriano; Sushil G Devare; John Hackett
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

5.  Evaluation of the VACUTAINER PPT Plasma Preparation Tube for use with the Bayer VERSANT assay for quantification of human immunodeficiency virus type 1 RNA.

Authors:  Tarek Elbeik; Patricia Nassos; Patricia Kipnis; Barbara Haller; Valerie L Ng
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

6.  Simultaneous runs of the Bayer VERSANT HIV-1 version 3.0 and HCV bDNA version 3.0 quantitative assays on the system 340 platform provide reliable quantitation and improved work flow.

Authors:  Tarek Elbeik; Norman Markowitz; Patricia Nassos; Uday Kumar; Scott Beringer; Barbara Haller; Valerie Ng
Journal:  J Clin Microbiol       Date:  2004-07       Impact factor: 5.948

7.  Expanded genetic alphabets in the polymerase chain reaction.

Authors:  Zunyi Yang; Fei Chen; Stephen G Chamberlin; Steven A Benner
Journal:  Angew Chem Int Ed Engl       Date:  2010       Impact factor: 15.336

8.  Hepatitis C virus RNA quantitation in venous and capillary small-volume whole-blood samples.

Authors:  Tony Bruns; Katrin Steinmetzer; Eugen Ermantraut; Andreas Stallmach
Journal:  J Clin Microbiol       Date:  2009-08-19       Impact factor: 5.948

9.  Improved COBAS TaqMan hepatitis C virus test (Version 2.0) for use with the High Pure system: enhanced genotype inclusivity and performance characteristics in a multisite study.

Authors:  G Colucci; J Ferguson; C Harkleroad; S Lee; D Romo; S Soviero; J Thompson; M Velez; A Wang; Y Miyahara; S Young; C Sarrazin
Journal:  J Clin Microbiol       Date:  2007-09-26       Impact factor: 5.948

10.  Multicenter evaluation of the VERSANT hepatitis B virus DNA 3.0 assay.

Authors:  Joseph D C Yao; Marcel G H M Beld; Lynette Lin Ean Oon; Christopher H Sherlock; Jeffrey Germer; Sandra Menting; Su Yun Se Thoe; Linda Merrick; Rainer Ziermann; Johan Surtihadi; H James Hnatyszyn
Journal:  J Clin Microbiol       Date:  2004-02       Impact factor: 5.948

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