Literature DB >> 12356333

Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens.

Jon R Lloyd1, Ching Leang, Allison L Hodges Myerson, Maddalena V Coppi, Stacey Cuifo, Barb Methe, Steven J Sandler, Derek R Lovley.   

Abstract

A 9.6 kDa periplasmic c -type cytochrome, designated PpcA, was purified from the Fe(III)-reducing bacterium Geobacter sulfurreducens and characterized. The purified protein is basic (pI 9.5), contains three haems and has an N-terminal amino acid sequence closely related to those of the previously described trihaem c (7) cytochromes of Geobacter metallireducens and Desulfuromonas acetoxidans. The gene encoding PpcA was identified from the G. sulfurreducens genome using the N-terminal sequence, and encodes a protein of 71 amino acids (molecular mass 9.58 kDa) with 49% identity to the c (7) cytochrome of D. acetoxidans. In order to determine the physiological role of PpcA, a knockout mutant was prepared with a single-step recombination method. Acetate-dependent Fe(III) reduction was significantly inhibited in both growing cultures and cell suspensions of the mutant. When ppcA was expressed in trans, the full capacity for Fe(III) reduction with acetate was restored. The transfer of electrons from acetate to anthraquinone 2,6-disulphonate (AQDS; a humic acid analogue) and to U(VI) was also compromised in the mutant, but acetate-dependent reduction of fumarate was not altered. The rates of reduction of Fe(III), AQDS, U(VI) and fumarate were also the same in the wild type and ppcA mutant when hydrogen was supplied as the electron donor. When taken together with previous studies on other electron transport proteins in G. sulfurreducens, these results suggest that PpcA serves as an intermediary electron carrier from acetate to terminal Fe(III) reductases in the outer membrane, and is also involved in the transfer of electrons from acetate to U(VI) and humics.

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Year:  2003        PMID: 12356333      PMCID: PMC1223068          DOI: 10.1042/BJ20020597

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  36 in total

1.  Preparation and properties of three pure crystalline bacterial haem proteins.

Authors:  T HORIO; M D KAMEN
Journal:  Biochim Biophys Acta       Date:  1961-04-01

2.  Structure and sequence of the multihaem cytochrome c3.

Authors:  R Haser; M Pierrot; M Frey; F Payan; J P Astier; M Bruschi; J Le Gall
Journal:  Nature       Date:  1979 Dec 20-27       Impact factor: 49.962

3.  Multiheme cytochromes from the sulfur-reducing bacterium Desulfuromonas acetoxidans.

Authors:  I A Pereira; I Pacheco; M Y Liu; J Legall; A V Xavier; M Teixeira
Journal:  Eur J Biochem       Date:  1997-09-01

4.  Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese.

Authors:  D R Lovley; E J Phillips
Journal:  Appl Environ Microbiol       Date:  1988-06       Impact factor: 4.792

5.  Purification and characterization of triheme cytochrome c7 from the metal-reducing bacterium, Geobacter metallireducens.

Authors:  E Afkar; Y Fukumori
Journal:  FEMS Microbiol Lett       Date:  1999-06-15       Impact factor: 2.742

6.  Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer.

Authors:  J D Coates; D J Ellis; C V Gaw; D R Lovley
Journal:  Int J Syst Bacteriol       Date:  1999-10

7.  Cloning and sequence of cymA, a gene encoding a tetraheme cytochrome c required for reduction of iron(III), fumarate, and nitrate by Shewanella putrefaciens MR-1.

Authors:  C R Myers; J M Myers
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

8.  The hyperthermophilic bacterium, Thermotoga maritima, contains an unusually complex iron-hydrogenase: amino acid sequence analyses versus biochemical characterization.

Authors:  M F Verhagen; T O'Rourke; M W Adams
Journal:  Biochim Biophys Acta       Date:  1999-08-04

9.  The periplasmic 9.6-kilodalton c-type cytochrome of Geobacter sulfurreducens is not an electron shuttle to Fe(III).

Authors:  J R Lloyd; E L Blunt-Harris; D R Lovley
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

10.  Identification and characterization of a novel cytochrome c(3) from Shewanella frigidimarina that is involved in Fe(III) respiration.

Authors:  E H Gordon; A D Pike; A E Hill; P M Cuthbertson; S K Chapman; G A Reid
Journal:  Biochem J       Date:  2000-07-01       Impact factor: 3.857

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  85 in total

1.  MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.

Authors:  Jessica E Butler; Franz Kaufmann; Maddalena V Coppi; Cinthia Núñez; Derek R Lovley
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

Review 2.  Dissimilatory reduction of extracellular electron acceptors in anaerobic respiration.

Authors:  Katrin Richter; Marcus Schicklberger; Johannes Gescher
Journal:  Appl Environ Microbiol       Date:  2011-12-16       Impact factor: 4.792

3.  Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens.

Authors:  Byoung-Chan Kim; Xinlei Qian; Ching Leang; Maddalena V Coppi; Derek R Lovley
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

4.  OmcF, a putative c-Type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens.

Authors:  Byoung-Chan Kim; Ching Leang; Yan-Huai R Ding; Richard H Glaven; Maddalena V Coppi; Derek R Lovley
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

5.  The iron stimulon and fur regulon of Geobacter sulfurreducens and their role in energy metabolism.

Authors:  Mallory Embree; Yu Qiu; Wendy Shieu; Harish Nagarajan; Regina O'Neil; Derek Lovley; Karsten Zengler
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

6.  OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.

Authors:  Ching Leang; M V Coppi; D R Lovley
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

7.  DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.

Authors:  Cinthia Núñez; Abraham Esteve-Núñez; Carol Giometti; Sandra Tollaksen; Tripti Khare; Winston Lin; Derek R Lovley; Barbara A Methé
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

8.  Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.

Authors:  P R Pokkuluri; X Yang; Y Y Londer; M Schiffer
Journal:  J Struct Funct Genomics       Date:  2012-10-26

9.  Adaptation to disruption of the electron transfer pathway for Fe(III) reduction in Geobacter sulfurreducens.

Authors:  Ching Leang; L A Adams; K-J Chin; K P Nevin; B A Methé; J Webster; M L Sharma; D R Lovley
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

10.  Metabolic efficiency of Geobacter sulfurreducens growing on anodes with different redox potentials.

Authors:  Julian Bosch; Keun-Young Lee; Siang-Fu Hong; Falk Harnisch; Uwe Schröder; Rainer U Meckenstock
Journal:  Curr Microbiol       Date:  2014-02-20       Impact factor: 2.188

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