Literature DB >> 12351895

Crystal contacts engineering of aspartyl-tRNA synthetase from Thermus thermophilus: effects on crystallizability.

Christophe Charron1, Daniel Kern, Richard Giegé.   

Abstract

To understand how surface residues in a protein structure influence crystal growth, packing arrangement and crystal quality, crystal surfaces were modified and crystallizability of seven different mutants investigated. The model was aspartyl-tRNA synthetase-1 from Thermus thermophilus, a homodimer (M(r) 122000) with a subunit of 580 amino acids. Engineering concerned modification of amino acids involved in packing contacts in the orthorhombic lattice (P2(1)2121) of the synthetase. Comparison of the crystallization behaviour of the mutants indicates a correlation between disruption/addition of packing interactions and crystallizability of the mutants: disruption or modification of lattice contacts prevents crystallization or leads to crystals of poor quality. In contrast, addition of potential contacts leads to well-shaped crystals of same space group and cell parameters than wild-type crystals.

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Year:  2002        PMID: 12351895     DOI: 10.1107/s0907444902012787

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Application of protein engineering to enhance crystallizability and improve crystal properties.

Authors:  Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-04-21

2.  Improving protein crystal quality by selective removal of a Ca(2+)-dependent membrane-insertion loop.

Authors:  David B Neau; Nathaniel C Gilbert; Sue G Bartlett; Adam Dassey; Marcia E Newcomer
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-10-24

Review 3.  Optimization of crystallization conditions for biological macromolecules.

Authors:  Alexander McPherson; Bob Cudney
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-10-31       Impact factor: 1.056

4.  Systematic replacement of lysine with glutamine and alanine in Escherichia coli malate synthase G: effect on crystallization.

Authors:  David M Anstrom; Leslie Colip; Brian Moshofsky; Eric Hatcher; S James Remington
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-11-24

5.  Gene composer: database software for protein construct design, codon engineering, and gene synthesis.

Authors:  Don Lorimer; Amy Raymond; John Walchli; Mark Mixon; Adrienne Barrow; Ellen Wallace; Rena Grice; Alex Burgin; Lance Stewart
Journal:  BMC Biotechnol       Date:  2009-04-21       Impact factor: 2.563

6.  Protein-peptide complex crystallization: a case study on the ERK2 mitogen-activated protein kinase.

Authors:  Gergő Gógl; Imre Törő; Attila Reményi
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-02-16
  6 in total

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