| Literature DB >> 12238953 |
Jan Lehmann1, Margitta Retz, Jürgen Harder, Matthias Krams, Udo Kellner, Julia Hartmann, Kerstin Hohgräwe, Uta Raffenberg, Martin Gerber, Tillmann Loch, Klaus Weichert-Jacobsen, Michael Stöckle.
Abstract
BACKGROUND: Constitutive expression and localization of antimicrobial human beta-defensin-1 (HBD-1) in human kidneys as a potential mechanism of antimicrobial defense has been previously reported. Inducible expression of human beta-defensin-2 (HBD-2) has been described in various epithelial organs but not for the urogenital tract.Entities:
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Year: 2002 PMID: 12238953 PMCID: PMC128826 DOI: 10.1186/1471-2334-2-20
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Cycling protocol for HBD-1, HBD-2 and GAPDH RT-PCR
| Step | Denaturation time/temperature | Annealing time/temperature | Extension time/temperature | Number of cycles |
| HBD-1 | ||||
| 1 | 1 5 min/95°C | 30 sec/55°C | 30 sec/72°C | 1 |
| 2 | 30 sec/95°C | 30 sec/55°C | 30 sec/72°C | 28 |
| 3 | 30 sec/95°C | 30 sec 55°C | 10 min/72°C | 1 |
| HBD-2 | ||||
| 1 | 1 5 min/95°C | 30 sec/60°C | 30 sec/72°C | 1 |
| 2 | 30 sec/95°C | 30 sec/60°C | 30 sec/72°C | 28 |
| 3 | 30 sec/95°C | 30 sec/60°C | 10 min/72°C | 1 |
| 2 GAPDH | ||||
| 1 | 5 min/95°C | 30 sec/55°C or 60°C | 30 sec/72°C | 1 |
| 2 | 30 sec/95°C | 30 sec/55°C or 60°C | 30 sec/72°C | 28 |
| 3 | 30 sec/95°C | 30 sec/55°C or 60°C | 10 min/72°C | 1 |
1 Taq Polymerase added at the end of the first 5 min denaturation step. 2GAPDH RT-PCR was performed as duplex PCR in concert with either HBD-1 or HBD-2
Figure 1HBD-1 and HBD-2 specific RT-PCR of normal renal parenchyma and renal tissues with chronic infection. HBD-1 (Fig. 1a) specific RT-PCR (PCR product: 184 bp), HBD-2 (Fig. 1a) specific RT-PCR (PCR product: 255 bp). Samples were separated by 2% agarose gel electrophoresis and stained with ethidium bromide. Representative data from a panel of 30 specimens are presented. Lanes 1 to 10 represent renal tissue extracts with chronic infection. Lanes 11–20 show RT-PCR results of normal renal tissue extracts from tumor-bearing organs. Outer lanes (M) represent a 100 bp-ladder molecular-weight marker. The control reaction for correct cDNA synthesis in all samples was performed as RT-PCR for GAPDH (glyceraldehyde-3-phosphate dehydrogenase) yielding a 359 bp product. Correct positive and negative controls including amplification without reverse transcription or cDNA sample replaced by sterile water were performed with each original experiment but are not shown due to limited gel space.
Figure 2Immunostaining of formalin-fixed and paraffin-embedded sections of chronically infected kidneys with polyclonal rabbit anti-serum for HBD-1 (Fig. 2a) and HBD-2 (Fig. 2b). Strong cytoplasmatic staining by HBD-1 immunohistochemistry was experienced in 20 to 30 percent of distal tubules, loops of Henle and collecting ducts in all normal and chronically infected tissue sections. All glomerula and proximal tubules were negative for HBD-1 immunostaining. HBD-2 polyclonal antibody stained only sections from chronically infected tissue samples with moderate to strong intensity in distal tubules, loops of Henle and collecting ducts (Fig. 2b). Glomerula as well as proximal tubules showed no staining. Fig. 2c shows negative staining with preimmune rabbit serum.
Figure 3Cultured CAL-54 cells were stimulated with increasing TNFα (Fig. 3a), IL-1β (Fig. 3b), and LPS (Fig. 3c) concentrations for 6 hours in FCS-free medium. HBD-1 mRNA expression was analyzed by real-time RT-PCR. Bars represent the relative HBD-1 transcript levels normalized to GAPDH transcript levels.
Figure 4Cultured CAL-54 cells were stimulated with increasing TNFα (Fig. 4a), IL-1β (Fig. 4b), and LPS (Fig. 4c) concentrations for 6 hours in FCS-free medium and HBD-2 mRNA expression was analyzed by real-time RT-PCR. Bars represent the relative HBD-2 transcript levels normalized to GAPDH transcript levels.