Literature DB >> 12236768

Conformational and spectroscopic analysis of the tyrosyl radical dipeptide analogue in the gas phase and in aqueous solution by a density functional/continuum solvent model.

Emma Langella1, Roberto Improta, Vincenzo Barone.   

Abstract

The conformational and spectroscopic properties of the tyrosyl radical dipeptide analogue (T(R)DA) are investigated both in gas phase and in aqueous solution by means of density functional calculations. Electronic interactions between backbone and side chain, determining the relative stability of the different energy minimums, depend on the electronic state of the phenoxy substituent. As a consequence, (i) the conformational behavior of T(R)DA is quite different from that of the tyrosine dipeptide analogue, and (ii) the energy required for the homolytic breaking of the OH bond depends on the adopted conformation. The calculated hyperfine coupling constants are in good agreement with the available experimental results. Side-chain-backbone interactions cause an asymmetrization of the magnetic properties of the phenoxy ring and deviations from McConnell relationship. Solvent effects, taken into account by means of a combined discrete/continuum model, significantly affect both the conformational and the magnetic behavior of T(R)DA.

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Year:  2002        PMID: 12236768     DOI: 10.1021/ja020465k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

1.  Contribution of dipole-dipole interactions to the stability of the collagen triple helix.

Authors:  Roberto Improta; Rita Berisio; Luigi Vitagliano
Journal:  Protein Sci       Date:  2008-03-27       Impact factor: 6.725

2.  ESEEM studies of peptide nitrogen hyperfine coupling in tyrosyl radicals and model peptides.

Authors:  John McCracken; Ilya R Vassiliev; En-Che Yang; Kevin Range; Bridgette A Barry
Journal:  J Phys Chem B       Date:  2007-05-23       Impact factor: 2.991

3.  Peptide bond distortions from planarity: new insights from quantum mechanical calculations and peptide/protein crystal structures.

Authors:  Roberto Improta; Luigi Vitagliano; Luciana Esposito
Journal:  PLoS One       Date:  2011-09-16       Impact factor: 3.240

  3 in total

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