Literature DB >> 12210180

Simultaneous measurements of the electrophoretic mobility, diffusion coefficient and orientation of dsDNA during electrophoresis in polymer solutions.

Axel Ekani Nkodo1, Bernard Tinland.   

Abstract

We determined simultaneously the electrophoretic mobility, diffusion coefficient D and molecular orientation during electrophoresis of dsDNAs in polymer solutions ranging from the dilute to the semidilute regime. We established, for the first time, master scaling laws for the diffusion coefficient showing a universal behavior. A model found in the literature designed for the dilute regime allows, surprisingly, to describe the mobility data over the whole range of concentrations studied and at the same time the biased reptation with fluctuations (BRF) failed for the semidilute regime, even when constraint release of the network was taken into account. These quantitative determinations of D are of practical interest to evaluate band broadening during capillary electrophoresis and provide data for stimulating investigation of the physics of DNA electrophoretic motion.

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Year:  2002        PMID: 12210180     DOI: 10.1002/1522-2683(200208)23:16<2755::AID-ELPS2755>3.0.CO;2-#

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  6 in total

1.  Divergent dispersion behavior of ssDNA fragments during microchip electrophoresis in pDMA and LPA entangled polymer networks.

Authors:  Christopher P Fredlake; Daniel G Hert; Thomas P Niedringhaus; Jennifer S Lin; Annelise E Barron
Journal:  Electrophoresis       Date:  2012-05       Impact factor: 3.535

2.  DNA diffusion in mucus: effect of size, topology of DNAs, and transfection reagents.

Authors:  Hong Shen; Yueyue Hu; W M Saltzman
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

3.  Beyond Saffman-Delbruck approximation: a new regime for 2D diffusion of α-hemolysin complexes in supported lipid bilayer.

Authors:  Frédéric Harb; Joe Sarkis; Natalie Ferte; Bernard Tinland
Journal:  Eur Phys J E Soft Matter       Date:  2012-11-21       Impact factor: 1.890

Review 4.  Effect of the matrix on DNA electrophoretic mobility.

Authors:  Nancy C Stellwagen; Earle Stellwagen
Journal:  J Chromatogr A       Date:  2008-12-06       Impact factor: 4.759

5.  Diffusion in supported lipid bilayers: influence of substrate and preparation technique on the internal dynamics.

Authors:  C Scomparin; S Lecuyer; M Ferreira; T Charitat; B Tinland
Journal:  Eur Phys J E Soft Matter       Date:  2009-02       Impact factor: 1.890

6.  Insertion and self-diffusion of a monotopic protein, the Aquifex aeolicus sulfide quinone reductase, in supported lipid bilayers.

Authors:  Frédéric Harb; Laurence Prunetti; Marie-Thérèse Giudici-Orticoni; Marianne Guiral; Bernard Tinland
Journal:  Eur Phys J E Soft Matter       Date:  2015-10-22       Impact factor: 1.890

  6 in total

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