Literature DB >> 12207529

An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates.

Dmitry M Korzhnev1, Nikolai R Skrynnikov, Oscar Millet, Dennis A Torchia, Lewis E Kay.   

Abstract

Rotating-frame relaxation rates, R(1)(rho), are often measured in NMR studies of protein dynamics. We show here that large systematic errors can be introduced into measured values of heteronuclear R(1)(rho) rates using schemes which are usually employed to suppress cross-correlation between dipole-dipole and CSA relaxation mechanisms. For example, in a scalar-coupled two-spin X-H spin system the use of (1)H WALTZ16 decoupling or (1)H pulses applied at regularly spaced intervals leads to a significant overestimation of heteronuclear R(1)(rho) values. The problem is studied experimentally and theoretically for (15)N-(1)H and (13)C-(1)H spin pairs, and simple schemes are described which eliminate the artifacts. The approaches suggested are essential replacements of existing methodology if accurate dynamics parameters are to be extracted from spin-lock relaxation data sets.

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Year:  2002        PMID: 12207529     DOI: 10.1021/ja0204776

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  54 in total

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5.  Transiently populated intermediate functions as a branching point of the FF domain folding pathway.

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Review 8.  Chemical exchange in biomacromolecules: past, present, and future.

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9.  Biophysical and Dynamic Characterization of Fine-Tuned Binding of the Human Respiratory Syncytial Virus M2-1 Core Domain to Long RNAs.

Authors:  Icaro P Caruso; Giovana C Guimarães; Vitor B Machado; Marcelo A Fossey; Dieter Willbold; Fabio C L Almeida; Fátima P Souza
Journal:  J Virol       Date:  2020-11-09       Impact factor: 5.103

10.  Intrinsic domain and loop dynamics commensurate with catalytic turnover in an induced-fit enzyme.

Authors:  Omar Davulcu; Peter F Flynn; Michael S Chapman; Jack J Skalicky
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

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