Literature DB >> 12200547

Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae.

Herve Tettelin1, Vega Masignani, Michael J Cieslewicz, Jonathan A Eisen, Scott Peterson, Michael R Wessels, Ian T Paulsen, Karen E Nelson, Immaculada Margarit, Timothy D Read, Lawrence C Madoff, Alex M Wolf, Maureen J Beanan, Lauren M Brinkac, Sean C Daugherty, Robert T DeBoy, A Scott Durkin, James F Kolonay, Ramana Madupu, Matthew R Lewis, Diana Radune, Nadezhda B Fedorova, David Scanlan, Hoda Khouri, Stephanie Mulligan, Heather A Carty, Robin T Cline, Susan E Van Aken, John Gill, Maria Scarselli, Marirosa Mora, Emilia T Iacobini, Cecilia Brettoni, Giuliano Galli, Massimo Mariani, Filippo Vegni, Domenico Maione, Daniela Rinaudo, Rino Rappuoli, John L Telford, Dennis L Kasper, Guido Grandi, Claire M Fraser.   

Abstract

The 2,160,267 bp genome sequence of Streptococcus agalactiae, the leading cause of bacterial sepsis, pneumonia, and meningitis in neonates in the U.S. and Europe, is predicted to encode 2,175 genes. Genome comparisons among S. agalactiae, Streptococcus pneumoniae, Streptococcus pyogenes, and the other completely sequenced genomes identified genes specific to the streptococci and to S. agalactiae. These in silico analyses, combined with comparative genome hybridization experiments between the sequenced serotype V strain 2603 V/R and 19 S. agalactiae strains from several serotypes using whole-genome microarrays, revealed the genetic heterogeneity among S. agalactiae strains, even of the same serotype, and provided insights into the evolution of virulence mechanisms.

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Year:  2002        PMID: 12200547      PMCID: PMC129455          DOI: 10.1073/pnas.182380799

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

1.  Flexible sequence similarity searching with the FASTA3 program package.

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Journal:  Methods Mol Biol       Date:  2000

2.  Mosaicism in the alpha-like protein genes of group B streptococci.

Authors:  C S Lachenauer; R Creti; J L Michel; L C Madoff
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-15       Impact factor: 11.205

Review 3.  A concise guide to cDNA microarray analysis.

Authors:  P Hegde; R Qi; K Abernathy; C Gay; S Dharap; R Gaspard; J E Hughes; E Snesrud; N Lee; J Quackenbush
Journal:  Biotechniques       Date:  2000-09       Impact factor: 1.993

4.  Assigning protein functions by comparative genome analysis: protein phylogenetic profiles.

Authors:  M Pellegrini; E M Marcotte; M J Thompson; D Eisenberg; T O Yeates
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

5.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

6.  Interaction between the protein InlB of Listeria monocytogenes and lipoteichoic acid: a novel mechanism of protein association at the surface of gram-positive bacteria.

Authors:  R Jonquières; H Bierne; F Fiedler; P Gounon; P Cossart
Journal:  Mol Microbiol       Date:  1999-12       Impact factor: 3.501

7.  Identification of group B streptococcal Sip protein, which elicits cross-protective immunity.

Authors:  B R Brodeur; M Boyer; I Charlebois; J Hamel; F Couture; C R Rioux; D Martin
Journal:  Infect Immun       Date:  2000-10       Impact factor: 3.441

8.  Identification of vaccine candidates against serogroup B meningococcus by whole-genome sequencing.

Authors:  M Pizza; V Scarlato; V Masignani; M M Giuliani; B Aricò; M Comanducci; G T Jennings; L Baldi; E Bartolini; B Capecchi; C L Galeotti; E Luzzi; R Manetti; E Marchetti; M Mora; S Nuti; G Ratti; L Santini; S Savino; M Scarselli; E Storni; P Zuo; M Broeker; E Hundt; B Knapp; E Blair; T Mason; H Tettelin; D W Hood; A C Jeffries; N J Saunders; D M Granoff; J C Venter; E R Moxon; G Grandi; R Rappuoli
Journal:  Science       Date:  2000-03-10       Impact factor: 47.728

9.  The serotype of type Ia and III group B streptococci is determined by the polymerase gene within the polycistronic capsule operon.

Authors:  D O Chaffin; S B Beres; H H Yim; C E Rubens
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10.  Phagocytic cell killing mediated by secreted cytotoxic factors of Vibrio cholerae.

Authors:  V Punj; O Zaborina; N Dhiman; K Falzari; M Bagdasarian; A M Chakrabarty
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  202 in total

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Authors:  Ichiro Nakagawa; Ken Kurokawa; Atsushi Yamashita; Masanobu Nakata; Yusuke Tomiyasu; Nobuo Okahashi; Shigetada Kawabata; Kiyoshi Yamazaki; Tadayoshi Shiba; Teruo Yasunaga; Hideo Hayashi; Masahira Hattori; Shigeyuki Hamada
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

2.  Regulation and function of pilus island 1 in group B streptococcus.

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Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

3.  Genetics of streptococci, lactococci, and enterococci: review of the sixth international conference.

Authors:  Janet Yother; Patrick Trieu-Cuot; Todd R Klaenhammer; Willem M De Vos
Journal:  J Bacteriol       Date:  2002-11       Impact factor: 3.490

4.  ISSa4-based differentiation of Streptococcus agalactiae strains and identification of multiple target sites for ISSa4 insertions.

Authors:  Alexander Dmitriev; Adong Shen; Xuzhuang Shen; Yonghong Yang
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

5.  ClpE from Lactococcus lactis promotes repression of CtsR-dependent gene expression.

Authors:  Pekka Varmanen; Finn K Vogensen; Karin Hammer; Airi Palva; Hanne Ingmer
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

6.  MtaR, a regulator of methionine transport, is critical for survival of group B streptococcus in vivo.

Authors:  Daniel Shelver; Lakshmi Rajagopal; Theresa O Harris; Craig E Rubens
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

Review 7.  Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion.

Authors:  Harald Brüssow; Carlos Canchaya; Wolf-Dietrich Hardt
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

8.  A comparative genome analysis identifies distinct sorting pathways in gram-positive bacteria.

Authors:  David Comfort; Robert T Clubb
Journal:  Infect Immun       Date:  2004-05       Impact factor: 3.441

9.  Phylogenetic molecular function annotation.

Authors:  Barbara E Engelhardt; Michael I Jordan; Susanna T Repo; Steven E Brenner
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10.  Threonine phosphorylation prevents promoter DNA binding of the Group B Streptococcus response regulator CovR.

Authors:  Wan-Jung Lin; Don Walthers; James E Connelly; Kellie Burnside; Kelsea A Jewell; Linda J Kenney; Lakshmi Rajagopal
Journal:  Mol Microbiol       Date:  2009-01-23       Impact factor: 3.501

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