Literature DB >> 12192040

Targeted histone acetylation at the yeast CUP1 promoter requires the transcriptional activator, the TATA boxes, and the putative histone acetylase encoded by SPT10.

Chang-Hui Shen1, Benoit P Leblanc, Carolyn Neal, Ramin Akhavan, David J Clark.   

Abstract

The relationship between chromatin remodeling and histone acetylation at the yeast CUP1 gene was addressed. CUP1 encodes a metallothionein required for cell growth at high copper concentrations. Induction of CUP1 with copper resulted in targeted acetylation of both H3 and H4 at the CUP1 promoter. Nucleosomes containing upstream activating sequences and sequences farther upstream were the targets for H3 acetylation. Targeted acetylation of H3 and H4 required the transcriptional activator (Ace1p) and the TATA boxes, suggesting that targeted acetylation occurs when TATA-binding protein binds to the TATA box or at a later stage in initiation. We have shown previously that induction results in nucleosome repositioning over the entire CUP1 gene, which requires Ace1p but not the TATA boxes. Therefore, the movement of nucleosomes occurring on CUP1 induction is independent of targeted acetylation. Targeted acetylation of both H3 and H4 also required the product of the SPT10 gene, which encodes a putative histone acetylase implicated in regulation at core promoters. Disruption of SPT10 was lethal at high copper concentrations and correlated with slower induction and reduced maximum levels of CUP1 mRNA. These observations constitute evidence for a novel mechanism of chromatin activation at CUP1, with a major role for the TATA box.

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Year:  2002        PMID: 12192040      PMCID: PMC135642          DOI: 10.1128/MCB.22.18.6406-6416.2002

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  55 in total

1.  Enhancement of TBP binding by activators and general transcription factors.

Authors:  X Y Li; A Virbasius; X Zhu; M R Green
Journal:  Nature       Date:  1999-06-10       Impact factor: 49.962

2.  Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme.

Authors:  L Kuras; K Struhl
Journal:  Nature       Date:  1999-06-10       Impact factor: 49.962

3.  Distinct classes of yeast promoters revealed by differential TAF recruitment.

Authors:  X Y Li; S R Bhaumik; M R Green
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

Review 4.  ATP-dependent chromatin-remodeling complexes.

Authors:  M Vignali; A H Hassan; K E Neely; J L Workman
Journal:  Mol Cell Biol       Date:  2000-03       Impact factor: 4.272

5.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

6.  Global histone acetylation and deacetylation in yeast.

Authors:  M Vogelauer; J Wu; N Suka; M Grunstein
Journal:  Nature       Date:  2000-11-23       Impact factor: 49.962

7.  An initiation element in the yeast CUP1 promoter is recognized by RNA polymerase II in the absence of TATA box-binding protein if the DNA is negatively supercoiled.

Authors:  B P Leblanc; C J Benham; D J Clark
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-26       Impact factor: 11.205

Review 8.  Acetylation of histones and transcription-related factors.

Authors:  D E Sterner; S L Berger
Journal:  Microbiol Mol Biol Rev       Date:  2000-06       Impact factor: 11.056

9.  Steady-state levels of histone acetylation in Saccharomyces cerevisiae.

Authors:  J H Waterborg
Journal:  J Biol Chem       Date:  2000-04-28       Impact factor: 5.157

10.  Global role for chromatin remodeling enzymes in mitotic gene expression.

Authors:  J E Krebs; C J Fry; M L Samuels; C L Peterson
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

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  11 in total

1.  Activation of Saccharomyces cerevisiae HIS3 results in Gcn4p-dependent, SWI/SNF-dependent mobilization of nucleosomes over the entire gene.

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Journal:  Mol Cell Biol       Date:  2006-09-18       Impact factor: 4.272

2.  Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes.

Authors:  Toshiaki Tsubota; Christopher E Berndsen; Judith A Erkmann; Corey L Smith; Lanhao Yang; Michael A Freitas; John M Denu; Paul D Kaufman
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3.  Single-Molecule Analysis Reveals Linked Cycles of RSC Chromatin Remodeling and Ace1p Transcription Factor Binding in Yeast.

Authors:  Gunjan D Mehta; David A Ball; Peter R Eriksson; Razvan V Chereji; David J Clark; James G McNally; Tatiana S Karpova
Journal:  Mol Cell       Date:  2018-10-11       Impact factor: 17.970

4.  Yeast recombination enhancer is stimulated by transcription activation.

Authors:  Sevinc Ercan; Joseph C Reese; Jerry L Workman; Robert T Simpson
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

Review 5.  Regulation of histone gene expression in budding yeast.

Authors:  Peter R Eriksson; Dwaipayan Ganguli; V Nagarajavel; David J Clark
Journal:  Genetics       Date:  2012-05       Impact factor: 4.562

6.  Global regulation by the yeast Spt10 protein is mediated through chromatin structure and the histone upstream activating sequence elements.

Authors:  Peter R Eriksson; Geetu Mendiratta; Neil B McLaughlin; Tyra G Wolfsberg; Leonardo Mariño-Ramírez; Tiffany A Pompa; Mohendra Jainerin; David Landsman; Chang-Hui Shen; David J Clark
Journal:  Mol Cell Biol       Date:  2005-10       Impact factor: 4.272

7.  The N-Terminal Tail of Histone H3 Regulates Copper Homeostasis in Saccharomyces cerevisiae.

Authors:  Sakshi Singh; Rakesh Kumar Sahu; Raghuvir Singh Tomar
Journal:  Mol Cell Biol       Date:  2021-01-25       Impact factor: 4.272

8.  Spt10-dependent transcriptional activation in Saccharomyces cerevisiae requires both the Spt10 acetyltransferase domain and Spt21.

Authors:  David Hess; Bingsheng Liu; Nadia R Roan; Rolf Sternglanz; Fred Winston
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

9.  Analysis of transcriptional activation at a distance in Saccharomyces cerevisiae.

Authors:  Krista C Dobi; Fred Winston
Journal:  Mol Cell Biol       Date:  2007-05-25       Impact factor: 4.272

10.  A polar barrier to transcription can be circumvented by remodeler-induced nucleosome translocation.

Authors:  Daria A Gaykalova; V Nagarajavel; Vladimir A Bondarenko; Blaine Bartholomew; David J Clark; Vasily M Studitsky
Journal:  Nucleic Acids Res       Date:  2011-01-17       Impact factor: 16.971

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