| Literature DB >> 12190614 |
Tongye Shen1, Lawrence S Canino, J Andrew McCammon.
Abstract
We extend a model of Micheletti et al. [Phys. Rev. Lett. 87, 088102 (2001)]] used to study protein con-formations to the case in which there is an external force field. Under the self-consistent pair contact probability approximation, this residue-level resolution model can still be solved under pulling forces. We implement the algorithm using heterogeneous parameters and study the force-induced unfolding of a helical segment from the protein transformylase and of the beta-stranded domains from the protein titin. The results are qualitatively consistent with the results from more expensive, atomistic dynamics simulation. Despite the mean-field-like approach, we observed a sharp and cooperative unfolding transition.Entities:
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Year: 2002 PMID: 12190614 DOI: 10.1103/PhysRevLett.89.068103
Source DB: PubMed Journal: Phys Rev Lett ISSN: 0031-9007 Impact factor: 9.161