Literature DB >> 12174220

Integrating sibship data for mapping quantitative trait loci.

S Ghosh1, T Reich.   

Abstract

Sibship methods have been shown to be more powerful than traditional sib-pair methods in mapping quantative trait loci. We propose a statistical procedure which integrates data on sibships into a so-called 'contrast function', a natural extension of the classical squared sib-pair trait difference proposed by Haseman & Elston (1972). We also develop a combined mean and contrast function which provides more information on linkage compared to the contrast function. Our method is extended to multiple, epistatically interacting trait loci. Monte-Carlo simulations are included to compare the efficiencies of the proposed procedures with some currently used methods. An application of our proposed method is presented using data on alcohol dependence.

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Year:  2002        PMID: 12174220     DOI: 10.1017/S0003480002001070

Source DB:  PubMed          Journal:  Ann Hum Genet        ISSN: 0003-4800            Impact factor:   1.670


  4 in total

1.  Recent advances in human quantitative-trait-locus mapping: comparison of methods for selected sibling pairs.

Authors:  Karen T Cuenco; Jin P Szatkiewicz; Eleanor Feingold
Journal:  Am J Hum Genet       Date:  2003-09-10       Impact factor: 11.025

Review 2.  Mapping quantitative trait loci in humans: achievements and limitations.

Authors:  Partha P Majumder; Saurabh Ghosh
Journal:  J Clin Invest       Date:  2005-06       Impact factor: 14.808

3.  A novel non-parametric regression reveals linkage on chromosome 4 for the number of externalizing symptoms in sib-pairs.

Authors:  Saurabh Ghosh; Laura J Bierut; Bernice Porjesz; Howard J Edenberg; Danielle Dick; Alison Goate; Victor Hesselbrock; John Nurnberger; Tatiana Foroud; John Kramer; John Rice; Henri Begleiter
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2008-10-05       Impact factor: 3.568

4.  Linkage mapping of total cholesterol level in a young cohort via nonparametric regression.

Authors:  Saurabh Ghosh; Sarah Bertelsen; Theodore Reich
Journal:  BMC Genet       Date:  2003-12-31       Impact factor: 2.797

  4 in total

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