Literature DB >> 12167356

Wright-Fisher revisited: the case of fertility correlation.

Alexandre Sibert1, Frédéric Austerlitz, Evelyne Heyer.   

Abstract

We study the non-genetic inheritance of fertility from parents to offspring. For this purpose, we propose an exchangeable extension of the Wright-Fisher model. This extension allows us to introduce non-genetic fertility correlation in the forward in time process and to study its effects on the genealogies of individuals (or genes) samples. Since it is independent of the gene considered, this effect is uniform on the genome, even in diploid populations. For values of fertility correlation observed in human populations, we show that coalescence times are strongly but inhomogenously reduced and that the shape of gene genealogies is markedly unbalanced. Despite the fact that our simulations concern stationary populations, the former non-genetic effect is very similar to what has been described for populations of variable size such as populations passing through demographic bottleneck. However, additional strong tree imbalance due to non-genetic causes is reported here for the first time.

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Year:  2002        PMID: 12167356     DOI: 10.1006/tpbi.2002.1609

Source DB:  PubMed          Journal:  Theor Popul Biol        ISSN: 0040-5809            Impact factor:   1.570


  7 in total

1.  Detecting population growth, selection and inherited fertility from haplotypic data in humans.

Authors:  Frédéric Austerlitz; Luba Kalaydjieva; Evelyne Heyer
Journal:  Genetics       Date:  2003-11       Impact factor: 4.562

2.  Serial coalescent simulations suggest a weak genealogical relationship between Etruscans and modern Tuscans.

Authors:  Elise M S Belle; Uma Ramakrishnan; Joanna L Mountain; Guido Barbujani
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-15       Impact factor: 11.205

3.  Sociocultural behavior, sex-biased admixture, and effective population sizes in Central African Pygmies and non-Pygmies.

Authors:  Paul Verdu; Noémie S A Becker; Alain Froment; Myriam Georges; Viola Grugni; Lluis Quintana-Murci; Jean-Marie Hombert; Lolke Van der Veen; Sylvie Le Bomin; Serge Bahuchet; Evelyne Heyer; Frédéric Austerlitz
Journal:  Mol Biol Evol       Date:  2013-01-07       Impact factor: 16.240

4.  Detecting Recent Positive Selection with a Single Locus Test Bipartitioning the Coalescent Tree.

Authors:  Zongfeng Yang; Junrui Li; Thomas Wiehe; Haipeng Li
Journal:  Genetics       Date:  2017-12-07       Impact factor: 4.562

5.  Male dominance rarely skews the frequency distribution of Y chromosome haplotypes in human populations.

Authors:  J Stephen Lansing; Joseph C Watkins; Brian Hallmark; Murray P Cox; Tatiana M Karafet; Herawati Sudoyo; Michael F Hammer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-14       Impact factor: 11.205

6.  Relaxed Selection During a Recent Human Expansion.

Authors:  Stephan Peischl; Isabelle Dupanloup; Adrien Foucal; Michèle Jomphe; Vanessa Bruat; Jean-Christophe Grenier; Alexandre Gouy; K J Gilbert; Elias Gbeha; Lars Bosshard; Elodie Hip-Ki; Mawussé Agbessi; Alan Hodgkinson; Hélène Vézina; Philip Awadalla; Laurent Excoffier
Journal:  Genetics       Date:  2017-11-29       Impact factor: 4.562

7.  Matrilineal fertility inheritance detected in hunter-gatherer populations using the imbalance of gene genealogies.

Authors:  Michael G B Blum; Evelyne Heyer; Olivier François; Fréderic Austerlitz
Journal:  PLoS Genet       Date:  2006-06-21       Impact factor: 5.917

  7 in total

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