Literature DB >> 12164776

MALDI-TOF mass spectrometry-based SNP genotyping.

Wolfgang Pusch1, Jan-Henner Wurmbach, Herbert Thiele, Markus Kostrzewa.   

Abstract

In recent years a growing demand for simple and robust SNP genotyping platforms has arisen from the widespread use of SNPs in industrial and public research. The resulting knowledge about genotype/phenotype correlations is of special interest for the identification of potential new drug targets and in the field of pharmacogenomics. However, full exploitation of the available genomic information requires vast numbers of SNP analyses, as large cohorts of patients have to be screened for a large number of markers. Only very few of the current SNP genotyping techniques can cope with the resulting demands concerning sample throughput, automation, accuracy and cost-effectiveness. MALDI-TOF mass spectrometry has the potential to develop into a 'Gold Standard' for high-throughput SNP genotyping - if it has not already done so. This review will focus on the latest developments of this technology.

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Year:  2002        PMID: 12164776     DOI: 10.1517/14622416.3.4.537

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  18 in total

1.  MALDI mass spectrometry analysis of single nucleotide polymorphisms by photocleavage and charge-tagging.

Authors:  Sascha Sauer; Hans Lehrach; Richard Reinhardt
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

2.  Liquid chromatography-electrospray ionization mass spectrometry for simultaneous detection of mtDNA length and nucleotide polymorphisms.

Authors:  Herbert Oberacher; Harald Niederstätter; Walther Parson
Journal:  Int J Legal Med       Date:  2006-09-06       Impact factor: 2.686

Review 3.  Matrix-assisted laser desorption ionization-time of flight (maldi-tof) mass spectrometry for detection of antibiotic resistance mechanisms: from research to routine diagnosis.

Authors:  Jaroslav Hrabák; Eva Chudácková; Radka Walková
Journal:  Clin Microbiol Rev       Date:  2013-01       Impact factor: 26.132

Review 4.  Application of mass spectrometry to molecular diagnostics of viral infections.

Authors:  Lilia M Ganova-Raeva; Yury E Khudyakov
Journal:  Expert Rev Mol Diagn       Date:  2013-05       Impact factor: 5.225

5.  Function of the HVCN1 proton channel in airway epithelia and a naturally occurring mutation, M91T.

Authors:  David Iovannisci; Beate Illek; Horst Fischer
Journal:  J Gen Physiol       Date:  2010-06-14       Impact factor: 4.086

6.  A MEMS-Based Approach to Single Nucleotide Polymorphism Genotyping.

Authors:  Jing Zhu; Mirkó Palla; Stefano Ronca; Ronald Warpner; Jingyue Ju; Qiao Lin
Journal:  Sens Actuators A Phys       Date:  2013-06-01       Impact factor: 3.407

7.  Comparison of the genotyping results using DNA obtained from blood and saliva.

Authors:  Robert A Philibert; Olga Zadorozhnyaya; Steven R H Beach; Gene H Brody
Journal:  Psychiatr Genet       Date:  2008-12       Impact factor: 2.458

8.  Genotyping of Plasmodium falciparum pyrimethamine resistance by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry.

Authors:  Florian Marks; Christian G Meyer; Jürgen Sievertsen; Christian Timmann; Jennifer Evans; Rolf D Horstmann; Jürgen May
Journal:  Antimicrob Agents Chemother       Date:  2004-02       Impact factor: 5.191

9.  Population Pharmacokinetics and Pharmacogenetics of Ethambutol in Adult Patients Coinfected with Tuberculosis and HIV.

Authors:  Jesper Sundell; Emile Bienvenu; Sofia Birgersson; Angela Äbelö; Michael Ashton
Journal:  Antimicrob Agents Chemother       Date:  2020-01-27       Impact factor: 5.191

10.  Genome wide association study for the identification of genes associated with tail fat deposition in Chinese sheep breeds.

Authors:  Caiye Zhu; Na Li; Heping Cheng; Youji Ma
Journal:  Biol Open       Date:  2021-05-04       Impact factor: 2.422

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