Literature DB >> 12151216

SWIM, a novel Zn-chelating domain present in bacteria, archaea and eukaryotes.

Kira S Makarova1, L Aravind, Eugene V Koonin.   

Abstract

A previously undetected domain with a CxCx(n)CxH pattern of predicted zinc-chelating residues was identified in a variety of prokaryotic and eukaryotic proteins. These include bacterial ATPases of the SWI2/SNF2 family, plant MuDR transposases and transposase-derived Far1 nuclear proteins, and vertebrate MEK kinase-1. This domain was designated SWIM after SWI2/SNF2 and MuDR, and is predicted to have DNA-binding and protein-protein interaction functions in different contexts.

Entities:  

Mesh：

Substances：

Year:  2002        PMID： 12151216     DOI： 10.1016/s0968-0004(02)02140-0

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN： 0968-0004            Impact factor:   13.807


  37 in total

1.  Isolation, characterization, and heterologous expression of the biosynthesis gene cluster for the antitumor anthracycline steffimycin.

Authors:  Sonia Gullón; Carlos Olano; Mohamed S Abdelfattah; Alfredo F Braña; Jürgen Rohr; Carmen Méndez; José A Salas
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

2.  Analysis of the zinc finger domain of TnpA, a DNA targeting protein encoded by mobilizable transposon Tn4555.

Authors:  Melissa K Bacic; Jinesh C Jain; Anita C Parker; C Jeffrey Smith
Journal:  Plasmid       Date:  2007-01-03       Impact factor: 3.466

3.  Transposase-derived transcription factors regulate light signaling in Arabidopsis.

Authors:  Rongcheng Lin; Lei Ding; Claudio Casola; Daniel R Ripoll; Cédric Feschotte; Haiyang Wang
Journal:  Science       Date:  2007-11-23       Impact factor: 47.728

4.  Identification of two pentatricopeptide repeat genes required for RNA editing and zinc binding by C-terminal cytidine deaminase-like domains.

Authors:  Michael L Hayes; Karolyn Giang; Beniam Berhane; R Michael Mulligan
Journal:  J Biol Chem       Date:  2013-11-05       Impact factor: 5.157

5.  Molecular specification and patterning of progenitor cells in the lateral and medial ganglionic eminences.

Authors:  Eric S Tucker; Samantha Segall; Deepak Gopalakrishna; Yongqin Wu; Mike Vernon; Franck Polleux; Anthony-Samuel Lamantia
Journal:  J Neurosci       Date:  2008-09-17       Impact factor: 6.167

Review 6.  Transposable elements and the evolution of regulatory networks.

Authors:  Cédric Feschotte
Journal:  Nat Rev Genet       Date:  2008-05       Impact factor: 53.242

7.  Genome-wide gene expression profiles in response to plastid division perturbations.

Authors:  Jodi Maple; Per Winge; Astrid Elisabeth Tveitaskog; Daniela Gargano; Atle M Bones; Simon Geir Møller
Journal:  Planta       Date:  2011-06-29       Impact factor: 4.116

Review 8.  Frontonasal Dysplasia: Towards an Understanding of Molecular and Developmental Aetiology.

Authors:  Peter G Farlie; Naomi L Baker; Patrick Yap; Tiong Y Tan
Journal:  Mol Syndromol       Date:  2016-10-29

9.  Loss of the neurodevelopmental gene Zswim6 alters striatal morphology and motor regulation.

Authors:  David J Tischfield; Dave K Saraswat; Andrew Furash; Stephen C Fowler; Marc V Fuccillo; Stewart A Anderson
Journal:  Neurobiol Dis       Date:  2017-04-19       Impact factor: 5.996

10.  Arabidopsis FHY3 and HY5 positively mediate induction of COP1 transcription in response to photomorphogenic UV-B light.

Authors:  Xi Huang; Xinhao Ouyang; Panyu Yang; On Sun Lau; Gang Li; Jigang Li; Haodong Chen; Xing Wang Deng
Journal:  Plant Cell       Date:  2012-11-13       Impact factor: 11.277
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.