Literature DB >> 12141924

Synthetic antibiotic peptides database.

David Wade1, Jukka Englund.   

Abstract

A computerized database for synthetic antibiotic peptides, the SAPD, has been created and is available on the Internet at web address, http://oma.terkko.helsinki.fi:8080/~SAPD. The SAPD is modelled on two pre-existing computer databases for naturally occurring peptide antibiotics, the Antimicrobial Sequences Database and the Peptaibol Database, and it will contain both chemical and biological information on all published synthetic antibiotic peptides.

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Year:  2002        PMID： 12141924     DOI： 10.2174/0929866023408986

Source DB:  PubMed          Journal:  Protein Pept Lett        ISSN： 0929-8665            Impact factor:   1.890


  12 in total

1.  ANTIMIC: a database of antimicrobial sequences.

Authors:  M Brahmachary; S P T Krishnan; J L Y Koh; A M Khan; S H Seah; T W Tan; V Brusic; V B Bajic
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  The Peptaibol Database: a database for sequences and structures of naturally occurring peptaibols.

Authors:  Lee Whitmore; B A Wallace
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

3.  Analysis of peptaibol sequence composition: implications for in vivo synthesis and channel formation.

Authors:  L Whitmore; B A Wallace
Journal:  Eur Biophys J       Date:  2003-10-08       Impact factor: 1.733

4.  Machine learning assisted design of highly active peptides for drug discovery.

Authors:  Sébastien Giguère; François Laviolette; Mario Marchand; Denise Tremblay; Sylvain Moineau; Xinxia Liang; Éric Biron; Jacques Corbeil
Journal:  PLoS Comput Biol       Date:  2015-04-07       Impact factor: 4.475

5.  Collection of antimicrobial peptides database and its derivatives: Applications and beyond.

Authors:  Faiza Hanif Waghu; Susan Idicula-Thomas
Journal:  Protein Sci       Date:  2019-09-30       Impact factor: 6.725

6.  Improved methods for classification, prediction, and design of antimicrobial peptides.

Authors:  Guangshun Wang
Journal:  Methods Mol Biol       Date:  2015

7.  LAMP: A Database Linking Antimicrobial Peptides.

Authors:  Xiaowei Zhao; Hongyu Wu; Hairong Lu; Guodong Li; Qingshan Huang
Journal:  PLoS One       Date:  2013-06-18       Impact factor: 3.240

8.  DAMPD: a manually curated antimicrobial peptide database.

Authors:  Vijayaraghava Seshadri Sundararajan; Musa Nur Gabere; Ashley Pretorius; Saleem Adam; Alan Christoffels; Minna Lehväslaiho; John A C Archer; Vladimir B Bajic
Journal:  Nucleic Acids Res       Date:  2011-11-21       Impact factor: 16.971

9.  APD2: the updated antimicrobial peptide database and its application in peptide design.

Authors:  Guangshun Wang; Xia Li; Zhe Wang
Journal:  Nucleic Acids Res       Date:  2008-10-28       Impact factor: 16.971

10.  CAMP: a useful resource for research on antimicrobial peptides.

Authors:  Shaini Thomas; Shreyas Karnik; Ram Shankar Barai; V K Jayaraman; Susan Idicula-Thomas
Journal:  Nucleic Acids Res       Date:  2009-11-18       Impact factor: 16.971
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