Literature DB >> 12127459

Structural genomics of proteins from conserved biochemical pathways and processes.

Stephen K Burley1, Jeffrey B Bonanno.   

Abstract

During the past year, X-ray crystallographers and solution NMR spectroscopists have made significant progress towards the complete structural characterization of conserved biochemical pathways and processes. Some of these advances were made in the context of nascent structural genomics programs, which promise to accelerate structural studies of biologically and medically important proteins. The results of high-throughput protein production, crystallization, structure determination, homology modeling and functional annotation published by two such programs have provided insight into the evolution and function of enzymes in the isoprenoid biosynthesis and ribulose monophosphate pathways.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12127459     DOI: 10.1016/s0959-440x(02)00330-5

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  13 in total

1.  MAMMOTH (matching molecular models obtained from theory): an automated method for model comparison.

Authors:  Angel R Ortiz; Charlie E M Strauss; Osvaldo Olmea
Journal:  Protein Sci       Date:  2002-11       Impact factor: 6.725

2.  Expression screening, protein purification and NMR analysis of human protein domains for structural genomics.

Authors:  G E Folkers; B N M van Buuren; R Kaptein
Journal:  J Struct Funct Genomics       Date:  2004

3.  The PRESAT-vector: asymmetric T-vector for high-throughput screening of soluble protein domains for structural proteomics.

Authors:  Natsuko Goda; Takeshi Tenno; Hirotoshi Takasu; Hidekazu Hiroaki; Masahiro Shirakawa
Journal:  Protein Sci       Date:  2004-03       Impact factor: 6.725

4.  XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators.

Authors:  John Gately Luz; Christian A Hassig; Catherine Pickle; Adam Godzik; Barbara J Meyer; Ian A Wilson
Journal:  Genes Dev       Date:  2003-04-02       Impact factor: 11.361

5.  Characterization of a thermoacidophilic L-arabinose isomerase from Alicyclobacillus acidocaldarius: role of Lys-269 in pH optimum.

Authors:  Sang-Jae Lee; Dong-Woo Lee; Eun-Ah Choe; Young-Ho Hong; Seong-Bo Kim; Byoung-Chan Kim; Yu-Ryang Pyun
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

6.  High-throughput characterization of intrinsic disorder in proteins from the Protein Structure Initiative.

Authors:  Derrick E Johnson; Bin Xue; Megan D Sickmeier; Jingwei Meng; Marc S Cortese; Christopher J Oldfield; Tanguy Le Gall; A Keith Dunker; Vladimir N Uversky
Journal:  J Struct Biol       Date:  2012-05-29       Impact factor: 2.867

7.  Structural basis for a distinct catalytic mechanism in Trypanosoma brucei tryparedoxin peroxidase.

Authors:  Johannes Melchers; Michael Diechtierow; Krisztina Fehér; Irmgard Sinning; Ivo Tews; R Luise Krauth-Siegel; Claudia Muhle-Goll
Journal:  J Biol Chem       Date:  2008-08-06       Impact factor: 5.157

8.  Targeting the human cancer pathway protein interaction network by structural genomics.

Authors:  Yuanpeng Janet Huang; Dehua Hang; Long Jason Lu; Liang Tong; Mark B Gerstein; Gaetano T Montelione
Journal:  Mol Cell Proteomics       Date:  2008-05-18       Impact factor: 5.911

Review 9.  Structure-based functional inference in structural genomics.

Authors:  Sung-Hou Kim; Dong Hae Shin; In-Geol Choi; Ursula Schulze-Gahmen; Shengfeng Chen; Rosalind Kim
Journal:  J Struct Funct Genomics       Date:  2003

10.  The Protein Structure Initiative: achievements and visions for the future.

Authors:  Gaetano T Montelione
Journal:  F1000 Biol Rep       Date:  2012-04-02
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.