Literature DB >> 12121451

Constructing plant radiation hybrid panels.

Julie Wardrop1, John Snape, Wayne Powell, Gordon C Machray.   

Abstract

Radiation hybrid (RH) mapping, a somatic cell genetic technique, has been developed in animal systems as a general approach for the construction of long-range physical maps of chromosomes. This statistical method relies on X-ray induced breakage of chromosomes to determine the physical distance between markers, as well as their order on the chromosome. The method can be applied to single chromosomes or across the whole genome. The generation of plant (barley) radiation hybrids and their culture in vitro is described here. PCR-based marker systems are used to verify hybrid status and to demonstrate genome coverage. RH panels of the type generated can be used for physical mapping, map-based cloning, or sequence contig assembly. RH resources will greatly aid the physical characterisation of crop plants with large genomes.

Entities:  

Mesh:

Year:  2002        PMID: 12121451     DOI: 10.1046/j.1365-313x.2002.01351.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  16 in total

1.  Enhancing radiation hybrid mapping through whole genome amplification.

Authors:  Genesio M Karere; Leslie A Lyons; Lutz Froenicke
Journal:  Hereditas       Date:  2010-04       Impact factor: 3.271

2.  High-resolution radiation hybrid map of wheat chromosome 1D.

Authors:  Venu Kalavacharla; Khwaja Hossain; Yong Gu; Oscar Riera-Lizarazu; M Isabel Vales; Suresh Bhamidimarri; Jose L Gonzalez-Hernandez; Shivcharan S Maan; Shahryar F Kianian
Journal:  Genetics       Date:  2006-04-19       Impact factor: 4.562

3.  Exploiting plant somatic radiation hybrids for physical mapping of expressed sequence tags.

Authors:  J Wardrop; J Fuller; W Powell; G C Machray
Journal:  Theor Appl Genet       Date:  2003-09-25       Impact factor: 5.699

4.  Mapping nonrecombining regions in barley using multicolor FISH.

Authors:  M Karafiátová; J Bartoš; D Kopecký; L Ma; K Sato; A Houben; N Stein; J Doležel
Journal:  Chromosome Res       Date:  2013-09-12       Impact factor: 5.239

5.  Wide-cross whole-genome radiation hybrid mapping of the cotton (Gossypium barbadense L.) genome.

Authors:  Wenxiang Gao; Z Jeffrey Chen; John Z Yu; Russell J Kohel; James E Womack; David M Stelly
Journal:  Mol Genet Genomics       Date:  2005-12-16       Impact factor: 3.291

6.  Physical mapping of chromosome 4J of Thinopyrum bessarabicum using gamma radiation-induced aberrations.

Authors:  Jing Pu; Qing Wang; Yuefeng Shen; Lifang Zhuang; Chenxu Li; Mengfa Tan; Tongde Bie; Chenggen Chu; Zengjun Qi
Journal:  Theor Appl Genet       Date:  2015-04-08       Impact factor: 5.699

7.  Genetic characterization of asymmetric somatic hybrids between Bupleurum scorzonerifolium Willd and Triticum aestivum L.: potential application to the study of the wheat genome.

Authors:  Chuanen Zhou; Guangmin Xia; Daying Zhi; Ying Chen
Journal:  Planta       Date:  2005-11-04       Impact factor: 4.116

8.  Telomere-mediated truncation of barley chromosomes.

Authors:  Eszter Kapusi; Lu Ma; Chee How Teo; Götz Hensel; Axel Himmelbach; Ingo Schubert; Michael Florian Mette; Jochen Kumlehn; Andreas Houben
Journal:  Chromosoma       Date:  2011-11-13       Impact factor: 4.316

9.  A radiation hybrid map of chromosome 1D reveals synteny conservation at a wheat speciation locus.

Authors:  Monika K Michalak de Jimenez; Filippo M Bassi; Farhad Ghavami; Kristin Simons; Rissa Dizon; Raed I Seetan; Loai M Alnemer; Anne M Denton; Münevver Doğramacı; Hana Šimková; Jaroslav Doležel; Kiran Seth; Ming-Cheng Luo; Jan Dvorak; Yong Qiang Gu; Shahryar F Kianian
Journal:  Funct Integr Genomics       Date:  2013-03-12       Impact factor: 3.410

10.  Wide-cross whole-genome radiation hybrid mapping of cotton (Gossypium hirsutum L.).

Authors:  Wenxiang Gao; Z Jeffrey Chen; John Z Yu; Dwaine Raska; Russell J Kohel; James E Womack; David M Stelly
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.