Literature DB >> 12117762

Advances in proteomic technologies.

Martin L Yarmush1, Arul Jayaraman.   

Abstract

Proteomics is a rapidly emerging set of key technologies that are being used to identify proteins and map their interactions in a cellular context. With the sequencing of the human genome, the scope of proteomics has shifted from protein identification and characterization to include protein structure, function and protein-protein interactions. Technologies used in proteomic research include two-dimensional gel electrophoresis, mass spectrometry, yeast two-hybrids screens, and computational prediction programs. While some of these technologies have been in use for a long time, they are currently being applied to study physiology and cellular processes in high-throughput formats. It is the high-throughput approach that defines and characterizes modern proteomics. In this review, we discuss the current status of these experimental and computational technologies relevant to the three major aspects of proteomics-characterization of proteomes, identification of proteins, and determination of protein function. We also briefly discuss the development of new proteomic technologies that are based on recent advances in analytical and biochemical techniques, engineering, microfabrication, and computational prowess. The integration of these advances with established technologies is invaluable for the drive toward a comprehensive understanding of protein structure and function in the cellular milieu.

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Year:  2002        PMID: 12117762     DOI: 10.1146/annurev.bioeng.4.020702.153443

Source DB:  PubMed          Journal:  Annu Rev Biomed Eng        ISSN: 1523-9829            Impact factor:   9.590


  13 in total

Review 1.  Proteomic contributions to our understanding of vaccine and immune responses.

Authors:  Allison C Galassie; Andrew J Link
Journal:  Proteomics Clin Appl       Date:  2015-09-10       Impact factor: 3.494

2.  A proteomics approach for the analysis of hemolymph proteins involved in the immediate defense response of the soft tick, Ornithodoros savignyi, when challenged with Candida albicans.

Authors:  Elaine Stopforth; Albert W H Neitz; Anabella R M Gaspar
Journal:  Exp Appl Acarol       Date:  2010-02-26       Impact factor: 2.132

3.  Proteomic identification of biomarkers of vascular injury.

Authors:  Ngan F Huang; Kyle Kurpinski; Qizhi Fang; Randall J Lee; Song Li
Journal:  Am J Transl Res       Date:  2010-11-21       Impact factor: 4.060

Review 4.  Models at the single cell level.

Authors:  Raymond Cheong; Saurabh Paliwal; Andre Levchenko
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2010 Jan-Feb

Review 5.  Proteomics: a strategy to understand the novel targets in protein misfolding and cancer therapy.

Authors:  Nagathihalli S Nagaraj; Om V Singh; Nipun B Merchant
Journal:  Expert Rev Proteomics       Date:  2010-08       Impact factor: 3.940

6.  In-depth proteomic analysis of mouse cochlear sensory epithelium by mass spectrometry.

Authors:  Lancia N F Darville; Bernd H A Sokolowski
Journal:  J Proteome Res       Date:  2013-06-26       Impact factor: 4.466

7.  Smart surface for elution of protein-protein bound particles: nanonewton dielectrophoretic forces using atomic layer deposited oxides.

Authors:  Sam Emaminejad; Mehdi Javanmard; Robert W Dutton; Ronald W Davis
Journal:  Anal Chem       Date:  2012-12-06       Impact factor: 6.986

8.  Millisecond kinetics on a microfluidic chip using nanoliters of reagents.

Authors:  Helen Song; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2003-11-26       Impact factor: 15.419

9.  Proteomic evaluation of neonatal exposure to 2,2 ,4,4 ,5-pentabromodiphenyl ether.

Authors:  Henrik Alm; Birger Scholz; Celia Fischer; Kim Kultima; Henrik Viberg; Per Eriksson; Lennart Dencker; Michael Stigson
Journal:  Environ Health Perspect       Date:  2006-02       Impact factor: 9.031

10.  Evaluation of protein pattern changes in roots and leaves of Zea mays plants in response to nitrate availability by two-dimensional gel electrophoresis analysis.

Authors:  Bhakti Prinsi; Alfredo S Negri; Paolo Pesaresi; Maurizio Cocucci; Luca Espen
Journal:  BMC Plant Biol       Date:  2009-08-23       Impact factor: 4.215

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