Literature DB >> 12116650

Bacterial species and speciation.

F M Cohan1.   

Abstract

Bacteria are profoundly different from eukaryotes in their patterns of genetic exchange. Nevertheless, ecological diversity is organized in the same way across all of life: individual organisms fall into more less discrete clusters on the basis of their phenotypic, ecological, and DNA sequence characteristics. Each sequence cluster in the bacterial world appears to correspond to an "ecotype," defined as a population of cells in the same ecological niche, which would all be out-competed by any adaptive mutant coming from the population. Ecotypes, so defined, share many of the dynamic properties attributed to eukaryotic species: genetic diversity within an ecotype is limited by a force of cohesion (in this case, periodic selection); different ecotypes are free to diverge without constraint from one another; and ecotypes are ecologically distinct. Also, ecotypes can be discovered and classified as DNA sequence clusters, even when we are ignorant of their ecology. Owing to the rarity and promiscuity of bacterial genetic exchange, speciation in the bacterial world is expected to be much less constrained than in the world of animals and plants.

Mesh:

Year:  2001        PMID: 12116650     DOI: 10.1080/10635150118398

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  110 in total

1.  Influence of recombination and niche separation on the population genetic structure of the pathogen Streptococcus pyogenes.

Authors:  Awdhesh Kalia; Brian G Spratt; Mark C Enright; Debra E Bessen
Journal:  Infect Immun       Date:  2002-04       Impact factor: 3.441

2.  Rapid divergence of two classes of Haemophilus ducreyi.

Authors:  Emily E Ricotta; Nan Wang; Robin Cutler; Jeffrey G Lawrence; Tricia L Humphreys
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

3.  Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches.

Authors:  Jeffrey G Lawrence; Graham F Hatfull; Roger W Hendrix
Journal:  J Bacteriol       Date:  2002-09       Impact factor: 3.490

4.  Cyanobacterial ecotypes in different optical microenvironments of a 68 degrees C hot spring mat community revealed by 16S-23S rRNA internal transcribed spacer region variation.

Authors:  Mike J Ferris; Michael Kühl; Andrea Wieland; David M Ward
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

5.  Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses.

Authors:  Nicholas D Crosbie; Matthias Pöckl; Thomas Weisse
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

Review 6.  Protist taxonomy: an ecological perspective.

Authors:  Bland J Finlay
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-04-29       Impact factor: 6.237

Review 7.  Prokaryote diversity and taxonomy: current status and future challenges.

Authors:  Aharon Oren
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-04-29       Impact factor: 6.237

Review 8.  Biodiversity of vibrios.

Authors:  Fabiano L Thompson; Tetsuya Iida; Jean Swings
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

Review 9.  Evolving entities: towards a unified framework for understanding diversity at the species and higher levels.

Authors:  Timothy G Barraclough
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-06-12       Impact factor: 6.237

Review 10.  Microbial Speciation.

Authors:  B Jesse Shapiro; Martin F Polz
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-09-09       Impact factor: 10.005

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