Literature DB >> 12115034

Comparative mapping of human Chromosome 19 with the chicken shows conserved synteny and gives an insight into chromosomal evolution.

Jacqueline Smith1, Ian R Paton, Frazer Murray, Richard P M A Crooijmans, Martien A M Groenen, David W Burt.   

Abstract

Human Chromosome 19 (HSA19) is virtually completely sequenced. A complete physical contig map made up of BACs and cosmids is also available for this chromosome. It is, therefore, a rich source of information that we have used as the basis for a comparative mapping study with the chicken. Various orthologs of genes known to map to HSA19 have been mapped in the chicken. Five chicken microchromosomes (two of which were previously undefined) are seen to show conserved synteny with this chromosome, along with individual gene homologs on Chr 1 and another tiny microchromosome. Compared with the mouse, which has 12 chromosomal regions homologous to HSA19, the chicken genotype displays fewer evolutionary rearrangements. The ancestral nature of the chicken karyotype is demonstrated and may prove to be an excellent tool for studying genome evolution.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12115034     DOI: 10.1007/s00335-001-3071-1

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  12 in total

1.  Development of a gene-based radiation hybrid map of chicken Chromosome 7 and comparison to human and mouse.

Authors:  Mireille Morisson; Carine Jiguet-Jiglaire; Sophie Leroux; Thomas Faraut; Suzanne Bardes; Katia Feve; Carine Genet; Frédérique Pitel; Denis Milan; Alain Vignal
Journal:  Mamm Genome       Date:  2004-09       Impact factor: 2.957

2.  Clustering of genes coding for DNA binding proteins in a region of atypical evolution of the human genome.

Authors:  Jose Castresana; Roderic Guigó; M Mar Albà
Journal:  J Mol Evol       Date:  2004-07       Impact factor: 2.395

3.  A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals.

Authors:  Candice Brinkmeyer-Langford; Terje Raudsepp; Eun-Joon Lee; Glenda Goh; Alejandro A Schäffer; Richa Agarwala; Michelle L Wagner; Teruaki Tozaki; Loren C Skow; James E Womack; James R Mickelson; Bhanu P Chowdhary
Journal:  Mamm Genome       Date:  2005-09-14       Impact factor: 2.957

4.  Life without TTP: apparent absence of an important anti-inflammatory protein in birds.

Authors:  Wi S Lai; Deborah J Stumpo; Elizabeth A Kennington; Adam B Burkholder; James M Ward; David L Fargo; Perry J Blackshear
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2013-07-31       Impact factor: 3.619

5.  En bloc duplications, mutation rates, and densities of amino acid changes clarify the evolution of vertebrate alpha-1,3/4-fucosyltransferases.

Authors:  Daniel Petit; Abderrahman Maftah; Raymond Julien; Jean-Michel Petit
Journal:  J Mol Evol       Date:  2006-08-21       Impact factor: 2.395

6.  Estimation of the extent of synteny between Tetraodon nigroviridis and Homo sapiens genomes.

Authors:  Alain Bernot; Jean Weissenbach
Journal:  J Mol Evol       Date:  2004-10       Impact factor: 2.395

7.  Two different molecular defects in the Tva receptor gene explain the resistance of two tvar lines of chickens to infection by subgroup A avian sarcoma and leukosis viruses.

Authors:  Daniel Elleder; Deborah C Melder; Katerina Trejbalova; Jan Svoboda; Mark J Federspiel
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

8.  Regulator of sex-limitation (Rsl) encodes a pair of KRAB zinc-finger genes that control sexually dimorphic liver gene expression.

Authors:  Christopher J Krebs; Leslie K Larkins; Ryan Price; Kathryn M Tullis; Raymond D Miller; Diane M Robins
Journal:  Genes Dev       Date:  2003-10-16       Impact factor: 11.361

9.  Cell cycle localization, dimerization, and binding domain architecture of the telomere protein cPot1.

Authors:  Chao Wei; Carolyn M Price
Journal:  Mol Cell Biol       Date:  2004-03       Impact factor: 4.272

10.  Differential gene expression in femoral bone from red junglefowl and domestic chicken, differing for bone phenotypic traits.

Authors:  Carl-Johan Rubin; Johan Lindberg; Carolyn Fitzsimmons; Peter Savolainen; Per Jensen; Joakim Lundeberg; Leif Andersson; Andreas Kindmark
Journal:  BMC Genomics       Date:  2007-07-02       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.