Literature DB >> 12112242

The role of the 5' untranslated region (UTR) in glucose-dependent mRNA decay.

Bernard J de la Cruz1, Susana Prieto, Immo E Scheffler.   

Abstract

When S. cerevisiae are grown with glucose, SDH2 mRNA encoding the iron protein of the succinate dehydrogenase complex is unstable and present at low level. In yeast grown without glucose, SDH2 mRNA is stable and its level rises. Addition of glucose to a glucose-limited culture causes the SDH2 mRNA level to fall rapidly with a half-life of approximately 5-7 min. Previously the 5'UTR of the mRNA of SDH2 was shown to be necessary and sufficient to destabilize it in glucose (Lombardo et al., 1992). We now show that the SDH1 and SUC2 5'UTRs are capable of conferring glucose-sensitive mRNA instability. We also examine how changes in the SDH2 5'UTR affect glucose-triggered degradation. Finally, we show that changes in mRNA stability are correlated with changes in translational efficiency for these transcripts. Copyright 2002 John Wiley & Sons, Ltd.

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Year:  2002        PMID: 12112242     DOI: 10.1002/yea.884

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  12 in total

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2.  MSARI: multiple sequence alignments for statistical detection of RNA secondary structure.

Authors:  Alex Coventry; Daniel J Kleitman; Bonnie Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-10       Impact factor: 11.205

3.  The AMP-activated protein kinase Snf1 regulates transcription factor binding, RNA polymerase II activity, and mRNA stability of glucose-repressed genes in Saccharomyces cerevisiae.

Authors:  Elton T Young; Chao Zhang; Kevan M Shokat; Pabitra K Parua; Katherine A Braun
Journal:  J Biol Chem       Date:  2012-07-02       Impact factor: 5.157

4.  5' to 3' mRNA Decay Contributes to the Regulation of Arabidopsis Seed Germination by Dormancy.

Authors:  Isabelle Basbouss-Serhal; Stéphanie Pateyron; Françoise Cochet; Juliette Leymarie; Christophe Bailly
Journal:  Plant Physiol       Date:  2017-01-26       Impact factor: 8.340

Review 5.  Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae.

Authors:  Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2003-04-25       Impact factor: 3.886

6.  Metabolic gene regulation in a dynamically changing environment.

Authors:  Matthew R Bennett; Wyming Lee Pang; Natalie A Ostroff; Bridget L Baumgartner; Sujata Nayak; Lev S Tsimring; Jeff Hasty
Journal:  Nature       Date:  2008-07-30       Impact factor: 49.962

7.  Snf1-Dependent Transcription Confers Glucose-Induced Decay upon the mRNA Product.

Authors:  Katherine A Braun; Kenneth M Dombek; Elton T Young
Journal:  Mol Cell Biol       Date:  2015-12-14       Impact factor: 4.272

8.  Regulation of conditional gene expression by coupled transcription repression and RNA degradation.

Authors:  Mathieu Lavoie; Dongling Ge; Sherif Abou Elela
Journal:  Nucleic Acids Res       Date:  2011-09-20       Impact factor: 16.971

9.  Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast.

Authors:  Markus Ringnér; Morten Krogh
Journal:  PLoS Comput Biol       Date:  2005-12-09       Impact factor: 4.475

10.  Alteration of ROS homeostasis and decreased lifespan in S. cerevisiae elicited by deletion of the mitochondrial translocator FLX1.

Authors:  Teresa Anna Giancaspero; Emilia Dipalo; Angelica Miccolis; Eckhard Boles; Michele Caselle; Maria Barile
Journal:  Biomed Res Int       Date:  2014-05-08       Impact factor: 3.411

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