Literature DB >> 12111400

Mesoscopic dynamics of colloids simulated with dissipative particle dynamics and fluid particle model.

Witold Dzwinel1, David A Yuen, Krzysztof Boryczko.   

Abstract

We report results of numerical simulations of complex fluids, using a combination of discrete-particle methods. Our molecular modeling repertoire comprises three simulation techniques: molecular dynamics (MD), dissipative particle dynamics (DPD), and the fluid particle model (FPM). This type of model can depict multi-resolution molecular structures found in complex fluids ranging from single micelle, colloidal crystals, large-scale colloidal aggregates up to the mesoscale processes of hydrodynamical instabilities in the bulk of colloidal suspensions. We can simulate different colloidal structures in which the colloidal beds are of comparable size to the solvent particles. This undertaking is accomplished with a two-level discrete particle model consisting of the MD paradigm with a Lennard-Jones (L-J) type potential for defining the colloidal particle system and DPD or FPM for modeling the solvent. We observe the spontaneous emergence of spherical or rod-like micelles and their crystallization in stable hexagonal or worm-like structures, respectively. The ordered arrays obtained by using the particle model are similar to the 2D colloidal crystals observed in laboratory experiments. The micelle shape and its hydrophobic or hydrophilic character depend on the ratio between the scaling factors of the interactions between colloid-colloid to colloid-solvent. Unlike the miscellar arrays, the colloidal aggregates involve the colloid-solvent interactions prescribed by the DPD forces. Different from the assumption of equilibrium growth, the two-level particle model can display much more realistic molecular physics, which allows for the simulation of aggregation for various types of colloids and solvent liquids over a very broad range of conditions. We discuss the potential prospects of combining MD, DPD, and FPM techniques in a single three-level model. Finally, we present results from large-scale simulation of the Rayleigh-Taylor instability and dispersion of colloidal slab in 2D and 3D. Electronic supplementary material to this paper can be obtained by using the Springer LINK server located at http://dx.doi.org/10.1007/s00894-001-0068-3.

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Year:  2002        PMID: 12111400     DOI: 10.1007/s00894-001-0068-3

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  5 in total

1.  Dynamical clustering of red blood cells in capillary vessels.

Authors:  Krzysztof Boryczko; Witold Dzwinel; David A Yuen
Journal:  J Mol Model       Date:  2003-01-16       Impact factor: 1.810

2.  Particle-based methods for multiscale modeling of blood flow in the circulation and in devices: challenges and future directions. Sixth International Bio-Fluid Mechanics Symposium and Workshop March 28-30, 2008 Pasadena, California.

Authors:  Takami Yamaguchi; Takuji Ishikawa; Y Imai; N Matsuki; Mikhail Xenos; Yuefan Deng; Danny Bluestein
Journal:  Ann Biomed Eng       Date:  2010-03       Impact factor: 3.934

3.  A Multiple Time Stepping Algorithm for Efficient Multiscale Modeling of Platelets Flowing in Blood Plasma.

Authors:  Peng Zhang; Na Zhang; Yuefan Deng; Danny Bluestein
Journal:  J Comput Phys       Date:  2015-03-01       Impact factor: 3.553

4.  Spatially resolved simulations of membrane reactions and dynamics: multipolar reaction DPD.

Authors:  R M Füchslin; T Maeke; J S McCaskill
Journal:  Eur Phys J E Soft Matter       Date:  2009-08-21       Impact factor: 1.890

5.  Parameterizing the Morse Potential for Coarse-Grained Modeling of Blood Plasma.

Authors:  Na Zhang; Peng Zhang; Wei Kang; Danny Bluestein; Yuefan Deng
Journal:  J Comput Phys       Date:  2014-01-15       Impact factor: 3.553

  5 in total

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