Literature DB >> 12107594

The evolution of the ribonucleotide reductases: much ado about oxygen.

Anthony M Poole1, Derek T Logan, Britt-Marie Sjöberg.   

Abstract

Ribonucleotide reduction is the only known biological means for de novo production of deoxyribonucleotides, the building blocks of DNA. These are produced from ribonucleotides, the building blocks of RNA, and the direction of this reaction has been taken to support the idea that, in evolution, RNA preceded DNA as genetic material. However, an understanding of the evolutionary relationships among the three modern-day classes of ribonucleotide reductase and how the first reductase arose early in evolution is still far off. We propose that the diversification of this class of enzymes is inherently tied to microbial colonization of aerobic and anaerobic niches. The work is of broader interest, as it also sheds light on the process of adaptation to oxygenic environments consequent to the evolution of atmospheric oxygen.

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Year:  2002        PMID: 12107594     DOI: 10.1007/s00239-002-2315-3

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  17 in total

1.  Insights into the lifestyle of uncultured bacterial natural product factories associated with marine sponges.

Authors:  Gerald Lackner; Eike Edzard Peters; Eric J N Helfrich; Jörn Piel
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-03       Impact factor: 11.205

2.  The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant.

Authors:  Yifeng Wei; Michael A Funk; Leonardo A Rosado; Jiyeon Baek; Catherine L Drennan; JoAnne Stubbe
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-25       Impact factor: 11.205

3.  The Bacillus subtilis nrdEF genes, encoding a class Ib ribonucleotide reductase, are essential for aerobic and anaerobic growth.

Authors:  Elisabeth Härtig; Anja Hartmann; Manuela Schätzle; Alessandra M Albertini; Dieter Jahn
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

Review 4.  Are we ready to use biomarkers for staging, prognosis and treatment selection in early-stage non-small-cell lung cancer?

Authors:  Bartomeu Massuti; Jose Miguel Sanchez; Florentino Hernando-Trancho; Niki Karachaliou; Rafael Rosell
Journal:  Transl Lung Cancer Res       Date:  2013-06

5.  Two distinct pools of B12 analogs reveal community interdependencies in the ocean.

Authors:  Katherine R Heal; Wei Qin; Francois Ribalet; Anthony D Bertagnolli; Willow Coyote-Maestas; Laura R Hmelo; James W Moffett; Allan H Devol; E Virginia Armbrust; David A Stahl; Anitra E Ingalls
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-27       Impact factor: 11.205

6.  The class Ib ribonucleotide reductase from Mycobacterium tuberculosis has two active R2F subunits.

Authors:  Marta Hammerstad; Asmund K Røhr; Niels H Andersen; Astrid Gräslund; Martin Högbom; K Kristoffer Andersson
Journal:  J Biol Inorg Chem       Date:  2014-03-02       Impact factor: 3.358

7.  RNRdb, a curated database of the universal enzyme family ribonucleotide reductase, reveals a high level of misannotation in sequences deposited to Genbank.

Authors:  Daniel Lundin; Eduard Torrents; Anthony M Poole; Britt-Marie Sjöberg
Journal:  BMC Genomics       Date:  2009-12-08       Impact factor: 3.969

8.  Ribonucleotide reduction in Mycobacterium tuberculosis: function and expression of genes encoding class Ib and class II ribonucleotide reductases.

Authors:  Stephanie S Dawes; Digby F Warner; Liana Tsenova; Juliano Timm; John D McKinney; Gilla Kaplan; Harvey Rubin; Valerie Mizrahi
Journal:  Infect Immun       Date:  2003-11       Impact factor: 3.441

9.  Coenzyme B12 controls transcription of the Streptomyces class Ia ribonucleotide reductase nrdABS operon via a riboswitch mechanism.

Authors:  Ilya Borovok; Batia Gorovitz; Rachel Schreiber; Yair Aharonowitz; Gerald Cohen
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

10.  Function and regulation of class I ribonucleotide reductase-encoding genes in mycobacteria.

Authors:  Mohube B Mowa; Digby F Warner; Gilla Kaplan; Bavesh D Kana; Valerie Mizrahi
Journal:  J Bacteriol       Date:  2008-11-21       Impact factor: 3.490

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