Literature DB >> 12107483

Codon optimization improves heterologous expression of a Schistosoma mansoni cDNA in HEK293 cells.

Fadi F Hamdan1, Aisha Mousa, Paula Ribeiro.   

Abstract

Differences in codon usage can seriously hamper the expression of cloned cDNAs in heterologous systems. In this study, we show that the expression of a cloned Schistosoma mansoni cDNA in cultured HEK293 cells was dramatically increased by rewriting a portion of the cDNA according to human preferred codon usage, suggesting that codon optimization is a valuable strategy for improving the heterologous expression of helminth sequences. We further describe a simple modification of a recursive PCR-based method, which allows the rewriting of long stretches of DNA sequence in a single PCR reaction. This method can be used to optimize the codon usage of virtually any DNA from helminths and other parasites.

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Year:  2002        PMID: 12107483     DOI: 10.1007/s00436-001-0585-0

Source DB:  PubMed          Journal:  Parasitol Res        ISSN: 0932-0113            Impact factor:   2.289


  12 in total

1.  Combinatorial Domain Hunting: An effective approach for the identification of soluble protein domains adaptable to high-throughput applications.

Authors:  Stefanie Reich; Loretto H Puckey; Caroline L Cheetham; Richard Harris; Ammar A E Ali; Uma Bhattacharyya; Kate Maclagan; Keith A Powell; Chrisostomos Prodromou; Laurence H Pearl; Paul C Driscoll; Renos Savva
Journal:  Protein Sci       Date:  2006-10       Impact factor: 6.725

Review 2.  Manipulating the genetic code for membrane protein production: what have we learnt so far?

Authors:  Morten H H Nørholm; Sara Light; Minttu T I Virkki; Arne Elofsson; Gunnar von Heijne; Daniel O Daley
Journal:  Biochim Biophys Acta       Date:  2011-08-22

Review 3.  Biogenic amines and the control of neuromuscular signaling in schistosomes.

Authors:  Paula Ribeiro; Vandana Gupta; Nelly El-Sakkary
Journal:  Invert Neurosci       Date:  2012-04-18

4.  Optimal codons in Tremella fuciformis end in C/G, a strong difference with known Tremella species.

Authors:  Youjin Deng; Xiaoxing Huang; Banzhan Ruan; Baogui Xie; Arend Frans van Peer; Yuji Jiang
Journal:  World J Microbiol Biotechnol       Date:  2015-08-08       Impact factor: 3.312

5.  Developmental expression analysis and immunolocalization of a biogenic amine receptor in Schistosoma mansoni.

Authors:  Fouad El-Shehabi; Jon J Vermeire; Timothy P Yoshino; Paula Ribeiro
Journal:  Exp Parasitol       Date:  2009-01-20       Impact factor: 2.011

6.  Soluble Expression and Catalytic Properties of Codon-Optimized Recombinant Bromelain from MD2 Pineapple in Escherichia coli.

Authors:  Rafida Razali; Cahyo Budiman; Khairul Azfar Kamaruzaman; Vijay Kumar Subbiah
Journal:  Protein J       Date:  2021-03-13       Impact factor: 2.371

7.  UU/UA dinucleotide frequency reduction in coding regions results in increased mRNA stability and protein expression.

Authors:  Maher Al-Saif; Khalid S A Khabar
Journal:  Mol Ther       Date:  2012-03-20       Impact factor: 11.454

8.  A novel G protein-coupled receptor of Schistosoma mansoni (SmGPR-3) is activated by dopamine and is widely expressed in the nervous system.

Authors:  Fouad El-Shehabi; Amira Taman; Lorena S Moali; Nelly El-Sakkary; Paula Ribeiro
Journal:  PLoS Negl Trop Dis       Date:  2012-02-28

9.  Transcriptional profiling of the bladder in urogenital schistosomiasis reveals pathways of inflammatory fibrosis and urothelial compromise.

Authors:  Debalina Ray; Tyrrell A Nelson; Chi-Ling Fu; Shailja Patel; Diana N Gong; Justin I Odegaard; Michael H Hsieh
Journal:  PLoS Negl Trop Dis       Date:  2012-11-29

10.  Expression of human nPTB is limited by extreme suboptimal codon content.

Authors:  Fiona Robinson; Richard J Jackson; Christopher W J Smith
Journal:  PLoS One       Date:  2008-03-12       Impact factor: 3.240

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