Literature DB >> 12093917

The protofilament structure of insulin amyloid fibrils.

José L Jiménez1, Ewan J Nettleton, Mario Bouchard, Carol V Robinson, Christopher M Dobson, Helen R Saibil.   

Abstract

Under solution conditions where the native state is destabilized, the largely helical polypeptide hormone insulin readily aggregates to form amyloid fibrils with a characteristic cross-beta structure. However, there is a lack of information relating the 4.8 A beta-strand repeat to the higher order assembly of amyloid fibrils. We have used cryo-electron microscopy (EM), combining single particle analysis and helical reconstruction, to characterize these fibrils and to study the three-dimensional (3D) arrangement of their component protofilaments. Low-resolution 3D structures of fibrils containing 2, 4, and 6 protofilaments reveal a characteristic, compact shape of the insulin protofilament. Considerations of protofilament packing indicate that the cross-beta ribbon is composed of relatively flat beta-sheets rather than being the highly twisted, beta-coil structure previously suggested by analysis of globular protein folds. Comparison of the various fibril structures suggests that very small, local changes in beta-sheet twist are important in establishing the long-range coiling of the protofilaments into fibrils of diverse morphology.

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Year:  2002        PMID: 12093917      PMCID: PMC123117          DOI: 10.1073/pnas.142459399

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

1.  SUPRIM: easily modified image processing software.

Authors:  J P Schroeter; J P Bretaudiere
Journal:  J Struct Biol       Date:  1996 Jan-Feb       Impact factor: 2.867

2.  SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields.

Authors:  J Frank; M Radermacher; P Penczek; J Zhu; Y Li; M Ladjadj; A Leith
Journal:  J Struct Biol       Date:  1996 Jan-Feb       Impact factor: 2.867

3.  Common core structure of amyloid fibrils by synchrotron X-ray diffraction.

Authors:  M Sunde; L C Serpell; M Bartlam; P E Fraser; M B Pepys; C C Blake
Journal:  J Mol Biol       Date:  1997-10-31       Impact factor: 5.469

4.  Refined fibril structures: the hydrophobic core in Alzheimer's amyloid beta-protein and prion as revealed by X-ray diffraction.

Authors:  H Inouye; D A Kirschner
Journal:  Ciba Found Symp       Date:  1996

5.  Self-seeded fibers formed by Sup35, the protein determinant of [PSI+], a heritable prion-like factor of S. cerevisiae.

Authors:  J R Glover; A S Kowal; E C Schirmer; M M Patino; J J Liu; S Lindquist
Journal:  Cell       Date:  1997-05-30       Impact factor: 41.582

6.  Polymorphic fibrillar assembly of human amylin.

Authors:  C S Goldsbury; G J Cooper; K N Goldie; S A Müller; E L Saafi; W T Gruijters; M P Misur; A Engel; U Aebi; J Kistler
Journal:  J Struct Biol       Date:  1997-06       Impact factor: 2.867

7.  Architecture and polymorphism of fibrillar supramolecular assemblies produced by in vitro aggregation of human calcitonin.

Authors:  H H Bauer; U Aebi; M Häner; R Hermann; M Müller; H P Merkle
Journal:  J Struct Biol       Date:  1995 Jul-Aug       Impact factor: 2.867

8.  PHOELIX: a package for semi-automated helical reconstruction.

Authors:  M Whittaker; B O Carragher; R A Milligan
Journal:  Ultramicroscopy       Date:  1995-06       Impact factor: 2.689

9.  Synchrotron X-ray studies suggest that the core of the transthyretin amyloid fibril is a continuous beta-sheet helix.

Authors:  C Blake; L Serpell
Journal:  Structure       Date:  1996-08-15       Impact factor: 5.006

10.  Atomic force microscopic imaging of seeded fibril formation and fibril branching by the Alzheimer's disease amyloid-beta protein.

Authors:  J D Harper; C M Lieber; P T Lansbury
Journal:  Chem Biol       Date:  1997-12
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  209 in total

1.  De novo designed peptide-based amyloid fibrils.

Authors:  Manuela López De La Paz; Kenneth Goldie; Jesús Zurdo; Emmanuel Lacroix; Christopher M Dobson; Andreas Hoenger; Luis Serrano
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-27       Impact factor: 11.205

2.  A structural model for Alzheimer's beta -amyloid fibrils based on experimental constraints from solid state NMR.

Authors:  Aneta T Petkova; Yoshitaka Ishii; John J Balbach; Oleg N Antzutkin; Richard D Leapman; Frank Delaglio; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-12       Impact factor: 11.205

3.  Chemical modification of insulin in amyloid fibrils.

Authors:  Melanie R Nilsson; Christopher M Dobson
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

4.  High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy.

Authors:  Christopher P Jaroniec; Cait E MacPhee; Vikram S Bajaj; Michael T McMahon; Christopher M Dobson; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

5.  Rapid amyloid fiber formation from the fast-folding WW domain FBP28.

Authors:  Neil Ferguson; John Berriman; Miriana Petrovich; Timothy D Sharpe; John T Finch; Alan R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-01       Impact factor: 11.205

6.  A Structural-informatics approach for tracing beta-sheets: building pseudo-C(alpha) traces for beta-strands in intermediate-resolution density maps.

Authors:  Yifei Kong; Xing Zhang; Timothy S Baker; Jianpeng Ma
Journal:  J Mol Biol       Date:  2004-05-21       Impact factor: 5.469

7.  Evidence for assembly of prions with left-handed beta-helices into trimers.

Authors:  Cédric Govaerts; Holger Wille; Stanley B Prusiner; Fred E Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-21       Impact factor: 11.205

8.  Pauling and Corey's alpha-pleated sheet structure may define the prefibrillar amyloidogenic intermediate in amyloid disease.

Authors:  Roger S Armen; Mari L DeMarco; Darwin O V Alonso; Valerie Daggett
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-27       Impact factor: 11.205

9.  Toxic fibrillar oligomers of amyloid-β have cross-β structure.

Authors:  James C Stroud; Cong Liu; Poh K Teng; David Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-30       Impact factor: 11.205

10.  Protective hinge in insulin opens to enable its receptor engagement.

Authors:  John G Menting; Yanwu Yang; Shu Jin Chan; Nelson B Phillips; Brian J Smith; Jonathan Whittaker; Nalinda P Wickramasinghe; Linda J Whittaker; Vijay Pandyarajan; Zhu-li Wan; Satya P Yadav; Julie M Carroll; Natalie Strokes; Charles T Roberts; Faramarz Ismail-Beigi; Wieslawa Milewski; Donald F Steiner; Virander S Chauhan; Colin W Ward; Michael A Weiss; Michael C Lawrence
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-04       Impact factor: 11.205

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