Literature DB >> 12084816

The genome-wide expression response to telomerase deletion in Saccharomyces cerevisiae.

Shivani Nautiyal1, Joseph L DeRisi, Elizabeth H Blackburn.   

Abstract

Loss of the protective function of telomeres has previously been hypothesized to cause a DNA damage response. Here, we report a genome-wide expression response, the telomerase deletion response (TDR), that occurs when telomeres can no longer be maintained by telomerase. The TDR shares features with other DNA damage responses and the environmental stress response. Unexpectedly, another feature of the TDR is the up-regulation of energy production genes, accompanied by a proliferation of mitochondria. Finally, a discrete set of genes, the "telomerase deletion signature", is uniquely up-regulated in the TDR but not under other conditions of stress and DNA damage that have been reported. The telomerase deletion signature genes define new candidates for involvement in cellular responses to altered telomere structure or function.

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Year:  2002        PMID: 12084816      PMCID: PMC123138          DOI: 10.1073/pnas.142162499

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast.

Authors:  J J Wyrick; F C Holstege; E G Jennings; H C Causton; D Shore; M Grunstein; E S Lander; R A Young
Journal:  Nature       Date:  1999-11-25       Impact factor: 49.962

Review 2.  DNA ends: maintenance of chromosome termini versus repair of double strand breaks.

Authors:  V Lundblad
Journal:  Mutat Res       Date:  2000-06-30       Impact factor: 2.433

3.  Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes.

Authors:  S A Jelinsky; P Estep; G M Church; L D Samson
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

4.  The Est1 subunit of yeast telomerase binds the Tlc1 telomerase RNA.

Authors:  J Zhou; K Hidaka; B Futcher
Journal:  Mol Cell Biol       Date:  2000-03       Impact factor: 4.272

Review 5.  Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast.

Authors:  F Estruch
Journal:  FEMS Microbiol Rev       Date:  2000-10       Impact factor: 16.408

6.  Telomere-telomere recombination is an efficient bypass pathway for telomere maintenance in Saccharomyces cerevisiae.

Authors:  S C Teng; V A Zakian
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

7.  Cloning and characterization of PET100, a gene required for the assembly of yeast cytochrome c oxidase.

Authors:  C Church; C Chapon; R O Poyton
Journal:  J Biol Chem       Date:  1996-08-02       Impact factor: 5.157

8.  TEL1, an S. cerevisiae homolog of the human gene mutated in ataxia telangiectasia, is functionally related to the yeast checkpoint gene MEC1.

Authors:  D M Morrow; D A Tagle; Y Shiloh; F S Collins; P Hieter
Journal:  Cell       Date:  1995-09-08       Impact factor: 41.582

9.  TEL1, a gene involved in controlling telomere length in S. cerevisiae, is homologous to the human ataxia telangiectasia gene.

Authors:  P W Greenwell; S L Kronmal; S E Porter; J Gassenhuber; B Obermaier; T D Petes
Journal:  Cell       Date:  1995-09-08       Impact factor: 41.582

10.  Single-stranded DNA arising at telomeres in cdc13 mutants may constitute a specific signal for the RAD9 checkpoint.

Authors:  B Garvik; M Carson; L Hartwell
Journal:  Mol Cell Biol       Date:  1995-11       Impact factor: 4.272

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  46 in total

1.  The transcriptome of prematurely aging yeast cells is similar to that of telomerase-deficient cells.

Authors:  Isabelle Lesur; Judith L Campbell
Journal:  Mol Biol Cell       Date:  2004-01-12       Impact factor: 4.138

2.  Early telomerase inactivation accelerates aging independently of telomere length.

Authors:  Zhengwei Xie; Kyle A Jay; Dana L Smith; Yi Zhang; Zairan Liu; Jiashun Zheng; Ruilin Tian; Hao Li; Elizabeth H Blackburn
Journal:  Cell       Date:  2015-02-26       Impact factor: 41.582

3.  Rap1 relocalization contributes to the chromatin-mediated gene expression profile and pace of cell senescence.

Authors:  Jesse M Platt; Paul Ryvkin; Jennifer J Wanat; Greg Donahue; M Dan Ricketts; Steven P Barrett; Hannah J Waters; Shufei Song; Alejandro Chavez; Khaled Omar Abdallah; Stephen R Master; Li-San Wang; F Brad Johnson
Journal:  Genes Dev       Date:  2013-06-11       Impact factor: 11.361

Review 4.  Aging of signal transduction pathways, and pathology.

Authors:  Morgan E Carlson; Haroldo S Silva; Irina M Conboy
Journal:  Exp Cell Res       Date:  2008-04-07       Impact factor: 3.905

5.  Est1 protects telomeres and inhibits subtelomeric y'-element recombination.

Authors:  Xia-Jing Tong; Qian-Jin Li; Yi-Min Duan; Ning-Ning Liu; Ming-Liang Zhang; Jin-Qiu Zhou
Journal:  Mol Cell Biol       Date:  2011-01-10       Impact factor: 4.272

Review 6.  Telomere recombination pathways: tales of several unhappy marriages.

Authors:  Neal F Lue; Eun Young Yu
Journal:  Curr Genet       Date:  2016-09-25       Impact factor: 3.886

7.  The telotype defines the telomere state in Saccharomyces cerevisiae and is inherited as a dominant non-Mendelian characteristic in cells lacking telomerase.

Authors:  Svetlana Makovets; Tanya L Williams; Elizabeth H Blackburn
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

8.  Distinct dosage requirements for the maintenance of long and short telomeres in mTert heterozygous mice.

Authors:  Natalie Erdmann; Yie Liu; Lea Harrington
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

9.  A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection.

Authors:  Amanda Greenall; Guiyuan Lei; Daniel C Swan; Katherine James; Liming Wang; Heiko Peters; Anil Wipat; Darren J Wilkinson; David Lydall
Journal:  Genome Biol       Date:  2008-10-01       Impact factor: 13.583

Review 10.  Taming the tiger by the tail: modulation of DNA damage responses by telomeres.

Authors:  David Lydall
Journal:  EMBO J       Date:  2009-07-23       Impact factor: 11.598

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