Literature DB >> 12083399

BeadArray technology: enabling an accurate, cost-effective approach to high-throughput genotyping.

Arnold Oliphant1, David L Barker, John R Stuelpnagel, Mark S Chee.   

Abstract

The Human Genome Project has opened the door to personalized medicine, provided that human genetic diversity can be analyzed in a high-throughput and cost-effective way Illumina has developed a genotyping system that combines very high throughput and accuracy with low cost per SNP analysis. The system uses our BeadArray platform, a high level of multiplexing, and modular, scalable automation to meet the requirements for cost-effective, genome-wide linkage disequilibrium studies. As implemented in a high-throughput genotyping service facility at Illumina, the system has a current capacity of one million SNP assays per day and is easily expandable. Each SNP call is associated with a quality score that correlates with accuracy

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Year:  2002        PMID: 12083399

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  201 in total

1.  Increasing the power and efficiency of disease-marker case-control association studies through use of allele-sharing information.

Authors:  Tasha E Fingerlin; Michael Boehnke; Gonçalo R Abecasis
Journal:  Am J Hum Genet       Date:  2004-02-02       Impact factor: 11.025

2.  Parallel gene analysis with allele-specific padlock probes and tag microarrays.

Authors:  Johan Banér; Anders Isaksson; Erik Waldenström; Jonas Jarvius; Ulf Landegren; Mats Nilsson
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

3.  A versatile assay for high-throughput gene expression profiling on universal array matrices.

Authors:  Jian-Bing Fan; Joanne M Yeakley; Marina Bibikova; Eugene Chudin; Eliza Wickham; Jing Chen; Dennis Doucet; Philippe Rigault; Baohong Zhang; Richard Shen; Celeste McBride; Hai-Ri Li; Xiang-Dong Fu; Arnold Oliphant; David L Barker; Mark S Chee
Journal:  Genome Res       Date:  2004-05       Impact factor: 9.043

4.  Two methods of whole-genome amplification enable accurate genotyping across a 2320-SNP linkage panel.

Authors:  David L Barker; Mark S T Hansen; A Fawad Faruqi; Diane Giannola; Orlando R Irsula; Roger S Lasken; Martin Latterich; Vladimir Makarov; Arnold Oliphant; Jonathon H Pinter; Richard Shen; Irina Sleptsova; William Ziehler; Eric Lai
Journal:  Genome Res       Date:  2004-05       Impact factor: 9.043

5.  Guidelines for genotyping in genomewide linkage studies: single-nucleotide-polymorphism maps versus microsatellite maps.

Authors:  David M Evans; Lon R Cardon
Journal:  Am J Hum Genet       Date:  2004-08-13       Impact factor: 11.025

6.  Sequence-based linkage analysis.

Authors:  Itay Furman; Mark J Rieder; Suzanne Da Ponte; Dana P Carrington; Deborah A Nickerson; Leonid Kruglyak; Kyriacos Markianos
Journal:  Am J Hum Genet       Date:  2004-08-25       Impact factor: 11.025

7.  A third base pair for the polymerase chain reaction: inserting isoC and isoG.

Authors:  Scott C Johnson; Christopher B Sherrill; David J Marshall; Michael J Moser; James R Prudent
Journal:  Nucleic Acids Res       Date:  2004-03-29       Impact factor: 16.971

8.  SNPWave: a flexible multiplexed SNP genotyping technology.

Authors:  Michiel J T van Eijk; José L N Broekhof; Hein J A van der Poel; René C J Hogers; Harrie Schneiders; Judith Kamerbeek; Esther Verstege; Joris W van Aart; Henk Geerlings; Jaap B Buntjer; A Jan van Oeveren; Pieter Vos
Journal:  Nucleic Acids Res       Date:  2004-03-05       Impact factor: 16.971

9.  What Next? The Next Transit from Biology to Diagnostics: Next Generation Sequencing for Immunogenetics.

Authors:  Christian Gabriel; Stephanie Stabentheiner; Martin Danzer; Johannes Pröll
Journal:  Transfus Med Hemother       Date:  2011-09-25       Impact factor: 3.747

10.  Analysis of 30 genes (355 SNPS) related to energy homeostasis for association with adiposity in European-American and Yup'ik Eskimo populations.

Authors:  Wendy K Chung; Amit Patki; Naoki Matsuoka; Bert B Boyer; Nianjun Liu; Solomon K Musani; Anna V Goropashnaya; Perciliz L Tan; Nicholas Katsanis; Stephen B Johnson; Peter K Gregersen; David B Allison; Rudolph L Leibel; Hemant K Tiwari
Journal:  Hum Hered       Date:  2008-12-15       Impact factor: 0.444

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