Literature DB >> 12080143

Metal ion-induced lateral aggregation of filamentous viruses fd and M13.

Jay X Tang1, Paul A Janmey, Alexander Lyubartsev, Lars Nordenskiöld.   

Abstract

We report a detailed comparison between calculations of inter-filament interactions based on Monte-Carlo simulations and experimental features of lateral aggregation of bacteriophages fd and M13 induced by a number of divalent metal ions. The general findings are consistent with the polyelectrolyte nature of the virus filaments and confirm that the solution electrostatics account for most of the experimental features observed. One particularly interesting discovery is resolubilization for bundles of either fd or M13 viruses when the concentration of the bundle-inducing metal ion Mg(2+) or Ca(2+) is increased to large (>100 mM) values. In the range of Mg(2+) or Ca(2+) concentrations where large bundles of the virus filaments are formed, the optimal attractive interaction energy between the virus filaments is estimated to be on the order of 0.01 kT per net charge on the virus surface when a recent analytical prediction to the experimentally defined conditions of resolubilization is applied. We also observed qualitatively distinct behavior between the alkali-earth metal ions and the divalent transition metal ions in their action on the charged viruses. The understanding of metal ions-induced reversible aggregation based on solution electrostatics may lead to potential applications in molecular biology and medicine.

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Year:  2002        PMID: 12080143      PMCID: PMC1302170          DOI: 10.1016/S0006-3495(02)75192-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  28 in total

1.  Condensation of DNA by trivalent cations. 1. Effects of DNA length and topology on the size and shape of condensed particles.

Authors:  P G Arscott; A Z Li; V A Bloomfield
Journal:  Biopolymers       Date:  1990       Impact factor: 2.505

2.  Competitive electrostatic binding of charged ligands to polyelectrolytes: practical approach using the non-linear Poisson-Boltzmann equation.

Authors:  I Rouzina; V A Bloomfield
Journal:  Biophys Chem       Date:  1997-02-28       Impact factor: 2.352

3.  Topological defects and the optimum size of DNA condensates.

Authors:  S Y Park; D Harries; W M Gelbart
Journal:  Biophys J       Date:  1998-08       Impact factor: 4.033

4.  The polyelectrolyte behavior of actin filaments: a 25Mg NMR study.

Authors:  W Xian; J X Tang; P A Janmey; W H Braunlin
Journal:  Biochemistry       Date:  1999-06-01       Impact factor: 3.162

5.  The mechanical properties of actin gels. Elastic modulus and filament motions.

Authors:  P A Janmey; S Hvidt; J Käs; D Lerche; A Maggs; E Sackmann; M Schliwa; T P Stossel
Journal:  J Biol Chem       Date:  1994-12-23       Impact factor: 5.157

Review 6.  Role of hydration and water structure in biological and colloidal interactions.

Authors:  J Israelachvili; H Wennerström
Journal:  Nature       Date:  1996-01-18       Impact factor: 49.962

7.  Monte Carlo and Poisson-Boltzmann calculations of the fraction of counterions bound to DNA.

Authors:  G Lamm; L Wong; G R Pack
Journal:  Biopolymers       Date:  1994-02       Impact factor: 2.505

8.  Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

Authors:  D C Rau; B Lee; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

9.  A gel electrophoresis study of the competitive effects of monovalent counterion on the extent of divalent counterions binding to DNA.

Authors:  A Z Li; H Huang; X Re; L J Qi; K A Marx
Journal:  Biophys J       Date:  1998-02       Impact factor: 4.033

10.  Condensation of DNA by multivalent cations: considerations on mechanism.

Authors:  V A Bloomfield
Journal:  Biopolymers       Date:  1991-11       Impact factor: 2.505

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  17 in total

1.  Multiscale study of counterion-induced attraction and bundle formation of F-actin using an Ising-like mean-field model.

Authors:  Xueping Yu; A E Carlsson
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Computer modeling demonstrates that electrostatic attraction of nucleosomal DNA is mediated by histone tails.

Authors:  Nikolay Korolev; Alexander P Lyubartsev; Lars Nordenskiöld
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

3.  Networks of gold nanoparticles and bacteriophage as biological sensors and cell-targeting agents.

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-24       Impact factor: 11.205

4.  Single M13 bacteriophage tethering and stretching.

Authors:  Ahmad S Khalil; Jorge M Ferrer; Ricardo R Brau; Stephen T Kottmann; Christopher J Noren; Matthew J Lang; Angela M Belcher
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-13       Impact factor: 11.205

Review 5.  Polyelectrolyte properties of filamentous biopolymers and their consequences in biological fluids.

Authors:  Paul A Janmey; David R Slochower; Yu-Hsiu Wang; Qi Wen; Andrejs Cēbers
Journal:  Soft Matter       Date:  2014-03-14       Impact factor: 3.679

6.  Ligand-induced DNA condensation: choosing the model.

Authors:  Vladimir B Teif
Journal:  Biophys J       Date:  2005-08-05       Impact factor: 4.033

7.  Ion-mediated nucleic acid helix-helix interactions.

Authors:  Zhi-Jie Tan; Shi-Jie Chen
Journal:  Biophys J       Date:  2006-04-28       Impact factor: 4.033

8.  Controlled self-assembly of rodlike bacterial pili particles into ordered lattices.

Authors:  Binrui Cao; Hong Xu; Chuanbin Mao
Journal:  Angew Chem Int Ed Engl       Date:  2011-05-30       Impact factor: 15.336

9.  Proteasome activator complex PA28 identified as an accessible target in prostate cancer by in vivo selection of human antibodies.

Authors:  David Sánchez-Martín; Jorge Martínez-Torrecuadrada; Tambet Teesalu; Kazuki N Sugahara; Ana Alvarez-Cienfuegos; Pilar Ximénez-Embún; Rodrigo Fernández-Periáñez; M Teresa Martín; Irene Molina-Privado; Isabel Ruppen-Cañás; Ana Blanco-Toribio; Marta Cañamero; Angel M Cuesta; Marta Compte; Leonor Kremer; Carmen Bellas; Vanesa Alonso-Camino; Irene Guijarro-Muñoz; Laura Sanz; Erkki Ruoslahti; Luis Alvarez-Vallina
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-05       Impact factor: 11.205

10.  A universal description for the experimental behavior of salt-(in)dependent oligocation-induced DNA condensation.

Authors:  Nikolay Korolev; Nikolay V Berezhnoy; Khee Dong Eom; James P Tam; Lars Nordenskiöld
Journal:  Nucleic Acids Res       Date:  2009-11       Impact factor: 16.971

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