Literature DB >> 12080059

Crystal structures at atomic resolution reveal the novel concept of "electron-harvesting" as a role for the small tetraheme cytochrome c.

David Leys1, Terrance E Meyer, Alexandre S Tsapin, Kenneth H Nealson, Michael A Cusanovich, Jozef J Van Beeumen.   

Abstract

The genus Shewanella produces a unique small tetraheme cytochrome c that is implicated in the iron oxide respiration pathway. It is similar in heme content and redox potential to the well known cytochromes c(3) but related in structure to the cytochrome c domain of soluble fumarate reductases from Shewanella sp. We report the crystal structure of the small tetraheme cytochrome c from Shewanella oneidensis MR-1 in two crystal forms and two redox states. The overall fold and heme core are surprisingly different from the soluble fumarate reductase structures. The high resolution obtained for an oxidized orthorhombic crystal (0.97 A) revealed several flexible regions. Comparison of the six monomers in the oxidized monoclinic space group (1.55 A) indicates flexibility in the C-terminal region containing heme IV. The reduced orthorhombic crystal structure (1.02 A) revealed subtle differences in the position of several residues, resulting in decreased solvent accessibility of hemes and the withdrawal of a positive charge from the molecular surface. The packing between monomers indicates that intermolecular electron transfer between any heme pair is possible. This suggests there is no unique site of electron transfer on the surface of the protein and that electron transfer partners may interact with any of the hemes, a process termed "electron-harvesting." This optimizes the efficiency of intermolecular electron transfer by maximizing chances of productive collision with redox partners.

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Keywords:  Non-programmatic

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Year:  2002        PMID: 12080059     DOI: 10.1074/jbc.M203866200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  20 in total

Review 1.  Dissimilatory reduction of extracellular electron acceptors in anaerobic respiration.

Authors:  Katrin Richter; Marcus Schicklberger; Johannes Gescher
Journal:  Appl Environ Microbiol       Date:  2011-12-16       Impact factor: 4.792

2.  Structure of a bacterial cell surface decaheme electron conduit.

Authors:  Thomas A Clarke; Marcus J Edwards; Andrew J Gates; Andrea Hall; Gaye F White; Justin Bradley; Catherine L Reardon; Liang Shi; Alexander S Beliaev; Matthew J Marshall; Zheming Wang; Nicholas J Watmough; James K Fredrickson; John M Zachara; Julea N Butt; David J Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-23       Impact factor: 11.205

3.  Thermodynamic characterization of a tetrahaem cytochrome isolated from a facultative aerobic bacterium, Shewanella frigidimarina: a putative redox model for flavocytochrome c3.

Authors:  Miguel Pessanha; Ricardo O Louro; Ilídio J Correia; Emma L Rothery; Kate L Pankhurst; Graeme A Reid; Stephen K Chapman; David L Turner; Carlos A Salgueiro
Journal:  Biochem J       Date:  2003-03-01       Impact factor: 3.857

4.  Divergent Nrf Family Proteins and MtrCAB Homologs Facilitate Extracellular Electron Transfer in Aeromonas hydrophila.

Authors:  Bridget E Conley; Peter J Intile; Daniel R Bond; Jeffrey A Gralnick
Journal:  Appl Environ Microbiol       Date:  2018-11-15       Impact factor: 4.792

Review 5.  Extracellular electron transfer mechanisms between microorganisms and minerals.

Authors:  Liang Shi; Hailiang Dong; Gemma Reguera; Haluk Beyenal; Anhuai Lu; Juan Liu; Han-Qing Yu; James K Fredrickson
Journal:  Nat Rev Microbiol       Date:  2016-08-30       Impact factor: 60.633

6.  A Hybrid Extracellular Electron Transfer Pathway Enhances the Survival of Vibrio natriegens.

Authors:  Bridget E Conley; Matthew T Weinstock; Daniel R Bond; Jeffrey A Gralnick
Journal:  Appl Environ Microbiol       Date:  2020-09-17       Impact factor: 4.792

7.  Molecular basis for directional electron transfer.

Authors:  Catarina M Paquete; Ivo H Saraiva; Eduardo Calçada; Ricardo O Louro
Journal:  J Biol Chem       Date:  2010-01-20       Impact factor: 5.157

8.  Characterization of transcriptional regulation of Shewanella frigidimarina Fe(III)-induced flavocytochrome c reveals a novel iron-responsive gene regulation system.

Authors:  Francisca Reyes-Ramirez; Paul Dobbin; Gary Sawers; David J Richardson
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

9.  The tetraheme cytochrome from Shewanella oneidensis MR-1 shows thermodynamic bias for functional specificity of the hemes.

Authors:  Bruno M Fonseca; Ivo H Saraiva; Catarina M Paquete; Claudio M Soares; Isabel Pacheco; Carlos A Salgueiro; Ricardo O Louro
Journal:  J Biol Inorg Chem       Date:  2008-12-02       Impact factor: 3.358

10.  Structure of a novel c7-type three-heme cytochrome domain from a multidomain cytochrome c polymer.

Authors:  P Raj Pokkuluri; Yuri Y Londer; Norma E C Duke; Jill Erickson; Miguel Pessanha; Carlos A Salgueiro; Marianne Schiffer
Journal:  Protein Sci       Date:  2004-05-07       Impact factor: 6.725

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