Literature DB >> 12079384

Crystal structures of the Met148Leu and Ser86Asp mutants of rusticyanin from Thiobacillus ferrooxidans: insights into the structural relationship with the cupredoxins and the multi copper proteins.

Lalji D Kanbi1, Svetlana Antonyuk, Michael A Hough, John F Hall, Fraser E Dodd, S Samar Hasnain.   

Abstract

The crystal structures of the Met148Leu and Ser86Asp mutants of rusticyanin are presented at 1.82 and 1.65 A resolution, respectively. Both of these structures have two molecules in the asymmetric unit compared to the one present in the crystal form of the native protein. This provides an opportunity to investigate intramolecular electron transfer pathways in rusticyanin. The redox potential of the Met148Leu mutant ( approximately 800 mV) is elevated compared to that of the native protein ( approximately 670 mV at pH 3.2) while that of the Ser86Asp mutant ( approximately 623 mV at pH 3.2) is decreased. The effect of the Ser86Asp mutation on the hydrogen bonding near the type 1 Cu site is discussed and hence its role in determining acid stability is examined. The type 1 Cu site of Met148Leu mimics the structural and biochemical characteristics of those found in domain II of ceruloplasmin and fungal laccase. Moreover, the native rusticyanin's cupredoxin core and the type 1 Cu site closely resemble those found in ascorbate oxidase and nitrite reductase. Structure based phylogenetic trees have been re-examined in view of the additional structural data on rusticyanin and fungal laccase. We confirm that rusticyanin is in the same class as nitrite reductase domain 2, laccase domain 3 and ceruloplasmin domains 2, 4 and 6.

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Year:  2002        PMID: 12079384     DOI: 10.1016/S0022-2836(02)00443-6

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  9 in total

1.  Rationally tuning the reduction potential of a single cupredoxin beyond the natural range.

Authors:  Nicholas M Marshall; Dewain K Garner; Tiffany D Wilson; Yi-Gui Gao; Howard Robinson; Mark J Nilges; Yi Lu
Journal:  Nature       Date:  2009-11-05       Impact factor: 49.962

Review 2.  Protein design: toward functional metalloenzymes.

Authors:  Fangting Yu; Virginia M Cangelosi; Melissa L Zastrow; Matteo Tegoni; Jefferson S Plegaria; Alison G Tebo; Catherine S Mocny; Leela Ruckthong; Hira Qayyum; Vincent L Pecoraro
Journal:  Chem Rev       Date:  2014-03-24       Impact factor: 60.622

Review 3.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

4.  In silico analysis of Pycnoporus cinnabarinus laccase active site with toxic industrial dyes.

Authors:  Nirmal K Prasad; Vaibhav Vindal; Siva Lakshmi Narayana; V Ramakrishna; Swaraj Priyaranjan Kunal; M Srinivas
Journal:  J Mol Model       Date:  2011-08-30       Impact factor: 1.810

5.  Genomic analysis reveals widespread occurrence of new classes of copper nitrite reductases.

Authors:  Mark J Ellis; J Günter Grossmann; Robert R Eady; S Samar Hasnain
Journal:  J Biol Inorg Chem       Date:  2007-08-22       Impact factor: 3.358

6.  Defining the role of the axial ligand of the type 1 copper site in amicyanin by replacement of methionine with leucine.

Authors:  Moonsung Choi; Narayanasami Sukumar; Aimin Liu; Victor L Davidson
Journal:  Biochemistry       Date:  2009-10-06       Impact factor: 3.162

7.  Spectroscopic and DFT studies of second-sphere variants of the type 1 copper site in azurin: covalent and nonlocal electrostatic contributions to reduction potentials.

Authors:  Ryan G Hadt; Ning Sun; Nicholas M Marshall; Keith O Hodgson; Britt Hedman; Yi Lu; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2012-10-02       Impact factor: 15.419

Review 8.  Design and fine-tuning redox potentials of metalloproteins involved in electron transfer in bioenergetics.

Authors:  Parisa Hosseinzadeh; Yi Lu
Journal:  Biochim Biophys Acta       Date:  2015-08-21

9.  Spectroscopic characterization of a green copper site in a single-domain cupredoxin.

Authors:  Magali Roger; Frédéric Biaso; Cindy J Castelle; Marielle Bauzan; Florence Chaspoul; Elisabeth Lojou; Giuliano Sciara; Stefano Caffarri; Marie-Thérèse Giudici-Orticoni; Marianne Ilbert
Journal:  PLoS One       Date:  2014-06-16       Impact factor: 3.240

  9 in total

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