Literature DB >> 12079336

Evolution of an antibiotic resistance enzyme constrained by stability and activity trade-offs.

Xiaojun Wang1, George Minasov, Brian K Shoichet.   

Abstract

Pressured by antibiotic use, resistance enzymes have been evolving new activities. Does such evolution have a cost? To investigate this question at the molecular level, clinically isolated mutants of the beta-lactamase TEM-1 were studied. When purified, mutant enzymes had increased activity against cephalosporin antibiotics but lost both thermodynamic stability and kinetic activity against their ancestral targets, penicillins. The X-ray crystallographic structures of three mutant enzymes were determined. These structures suggest that activity gain and stability loss is related to an enlarged active site cavity in the mutant enzymes. In several clinically isolated mutant enzymes, a secondary substitution is observed far from the active site (Met182-->Thr). This substitution had little effect on enzyme activity but restored stability lost by substitutions near the active site. This regained stability conferred an advantage in vivo. This pattern of stability loss and restoration may be common in the evolution of new enzyme activity. (c) 2002 Elsevier Science Ltd.

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Year:  2002        PMID: 12079336     DOI: 10.1016/S0022-2836(02)00400-X

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  209 in total

1.  Molecular analyses of TEM genes and their corresponding penicillinase-producing Neisseria gonorrhoeae isolates in Bangkok, Thailand.

Authors:  Shu-Ichi Nakayama; Chanwit Tribuddharat; Sasiprapa Prombhul; Ken Shimuta; Somporn Srifuengfung; Magnus Unemo; Makoto Ohnishi
Journal:  Antimicrob Agents Chemother       Date:  2011-12-05       Impact factor: 5.191

2.  Evolutionary potential of an RNA virus.

Authors:  Eugene V Makeyev; Dennis H Bamford
Journal:  J Virol       Date:  2004-02       Impact factor: 5.103

3.  Stability and the evolvability of function in a model protein.

Authors:  Jesse D Bloom; Claus O Wilke; Frances H Arnold; Christoph Adami
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

4.  Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.

Authors:  Olga Khersonsky; Gert Kiss; Daniela Röthlisberger; Orly Dym; Shira Albeck; Kendall N Houk; David Baker; Dan S Tawfik
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-08       Impact factor: 11.205

5.  Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites.

Authors:  Gregory R Bowman; Phillip L Geissler
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

Review 6.  Mutational effects and the evolution of new protein functions.

Authors:  Misha Soskine; Dan S Tawfik
Journal:  Nat Rev Genet       Date:  2010-08       Impact factor: 53.242

7.  Role of conservative mutations in protein multi-property adaptation.

Authors:  David Rodriguez-Larrea; Raul Perez-Jimenez; Inmaculada Sanchez-Romero; Asuncion Delgado-Delgado; Julio M Fernandez; Jose M Sanchez-Ruiz
Journal:  Biochem J       Date:  2010-07-15       Impact factor: 3.857

Review 8.  The population genetics of antibiotic resistance: integrating molecular mechanisms and treatment contexts.

Authors:  R Craig MacLean; Alex R Hall; Gabriel G Perron; Angus Buckling
Journal:  Nat Rev Genet       Date:  2010-06       Impact factor: 53.242

9.  Co-evolution of affinity and stability of grafted amyloid-motif domain antibodies.

Authors:  Mark C Julian; Christine C Lee; Kathryn E Tiller; Lilia A Rabia; Evan K Day; Arthur J Schick; Peter M Tessier
Journal:  Protein Eng Des Sel       Date:  2015-09-19       Impact factor: 1.650

Review 10.  Directed polymerase evolution.

Authors:  Tingjian Chen; Floyd E Romesberg
Journal:  FEBS Lett       Date:  2013-11-05       Impact factor: 4.124

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