Literature DB >> 12074888

Reverse genetics of essential genes in tissue-culture cells: 'dead cells talking'.

Damien F Hudson1, Ciaran Morrison, Sandrine Ruchaud, William C Earnshaw.   

Abstract

In the 'post-genomic' era, cDNA and genomic sequences are now available that encode huge numbers of proteins. Assigning functions to these proteins is a daunting task. Cell biologists have traditionally approached this problem by disrupting protein function with dominant-negative or structural mutants. Here, we describe several alternative approaches whereby cells or cell lines lacking particular gene products can be generated from genomic sequences for use in functional studies. These include gene targeting in mouse, human and chicken DT40 cells, and recent advances in double-stranded RNA-mediated interference (RNAi).

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Year:  2002        PMID: 12074888     DOI: 10.1016/s0962-8924(02)02281-x

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  18 in total

Review 1.  Reverse genetics for proteomics: from proteomic discovery to scientific content.

Authors:  M Bauer; M Ueffing
Journal:  J Neural Transm (Vienna)       Date:  2006-07-13       Impact factor: 3.575

2.  A promoter-hijack strategy for conditional shutdown of multiply spliced essential cell cycle genes.

Authors:  Kumiko Samejima; Hiromi Ogawa; Carol A Cooke; Damien F Hudson; Damien Hudson; Fiona Macisaac; Susana A Ribeiro; Paola Vagnarelli; Stefano Cardinale; Alastair Kerr; Fan Lai; Sandrine Ruchaud; Zuojun Yue; William C Earnshaw
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-08       Impact factor: 11.205

3.  Disruption of a conserved CAP-D3 threonine alters condensin loading on mitotic chromosomes leading to chromosome hypercondensation.

Authors:  Muhammed Bakhrebah; Tao Zhang; Jeff R Mann; Paul Kalitsis; Damien F Hudson
Journal:  J Biol Chem       Date:  2015-01-20       Impact factor: 5.157

Review 4.  What rheumatologists need to know about CRISPR/Cas9.

Authors:  Gary J Gibson; Maozhou Yang
Journal:  Nat Rev Rheumatol       Date:  2017-02-09       Impact factor: 20.543

5.  Similar effects of Brca2 truncation and Rad51 paralog deficiency on immunoglobulin V gene diversification in DT40 cells support an early role for Rad51 paralogs in homologous recombination.

Authors:  Atsushi Hatanaka; Mitsuyoshi Yamazoe; Julian E Sale; Minoru Takata; Kazuhiko Yamamoto; Hiroyuki Kitao; Eiichiro Sonoda; Koji Kikuchi; Yasukazu Yonetani; Shunichi Takeda
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

6.  Use of DT40 conditional-knockout cell lines to study chromosomal passenger protein function.

Authors:  Xavier Fant; Kumiko Samejima; Ana Carvalho; Hiromi Ogawa; Zhenjie Xu; Zuojun Yue; William C Earnshaw; Sandrine Ruchaud
Journal:  Biochem Soc Trans       Date:  2010-12       Impact factor: 5.407

7.  Molecular cytogenetic definition of the chicken genome: the first complete avian karyotype.

Authors:  Julio S Masabanda; Dave W Burt; Patricia C M O'Brien; Alain Vignal; Valerie Fillon; Philippa S Walsh; Helen Cox; Helen G Tempest; Jacqueline Smith; Felix Habermann; Michael Schmid; Yoichi Matsuda; Malcolm A Ferguson-Smith; Richard P M A Crooijmans; Martien A M Groenen; Darren K Griffin
Journal:  Genetics       Date:  2004-03       Impact factor: 4.562

8.  Construction, characterization, and complementation of a conditional-lethal DNA topoisomerase IIalpha mutant human cell line.

Authors:  Adam J Carpenter; Andrew C G Porter
Journal:  Mol Biol Cell       Date:  2004-09-29       Impact factor: 4.138

9.  Expressed sequence tags of Trichinella spiralis muscle stage larvae.

Authors:  Hae Kyung Park; Seong Won Chang; Se Won Kang; Min Kyoung Cho; Sun Hee Choi; Yeon Chul Hong; Yong Seok Lee; Hae Jin Jeong; Hak Sun Yu
Journal:  Korean J Parasitol       Date:  2008-06       Impact factor: 1.341

10.  In ovo RNAi opens new possibilities for temporal and spatial control of gene silencing during development of the vertebrate nervous system.

Authors:  Thomas Baeriswyl; Esther T Stoeckli
Journal:  J RNAi Gene Silencing       Date:  2006-02-28
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