Literature DB >> 12071961

EPR characterization of the mononuclear Cu-containing Aspergillus japonicus quercetin 2,3-dioxygenase reveals dramatic changes upon anaerobic binding of substrates.

Ingeborg M Kooter1, Roberto A Steiner, Bauke W Dijkstra, Paula I van Noort, Maarten R Egmond, Martina Huber.   

Abstract

Quercetin 2,3-dioxygenase (2,3QD) is a copper-containing dioxygenase that catalyses the oxidation of the flavonol quercetin to 2-protocatechuoylphloroglucinol carboxylic acid with concomitant production of carbon monoxide. In contrast to iron dioxygenases, very little is known about copper dioxygenases. We have characterized 2,3QD from the fungus Aspergillus japonicus by electron paramagnetic resonance spectroscopy (EPR). At pH 6.0, 2,3QD shows a mixture of two EPR species. The major form has parameters typical of type 2 Cu sites (g// = 2.330, A// = 13.7 mT), the minor one has a more distorted geometry (g// = 2.290, A// = 12.5 mT). Anaerobic addition of the substrate quercetin results in a different, single species EPR spectrum with g// = 2.336, A// = 11.4 mT, parameters, which are in-between those of the type 2 and type 1 Cu sites in the Peisach-Blumberg (g// vs. A//) plot. After turnover, a new EPR signal is observed, which is ascribed to the carboxylic acid ester product complex. This spectrum is similar to that of the native enzyme at pH 10.0 and has g-tensor parameters suggesting a trigonal bipyramidal site. Of a variety of flavonoids studied, only flavonols are able to bind to the copper centre of 2,3QD. Nine flavonols with different hydroxylation patterns at the A- and B-ring have been analysed. They cluster in two different regions of the Peisach-Blumberg plot and show that the presence of a 5-OH group has a large effect on the A// parameter. Several differences are noted between A. japonicus 2,3QD and the enzyme from A. niger German Collection of Microorganisms 821.

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Year:  2002        PMID: 12071961     DOI: 10.1046/j.1432-1033.2002.02973.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

1.  Single-crystal EPR study at 95 GHz of the type 2 copper site of the inhibitor-bound quercetin 2,3-dioxygenase.

Authors:  Maria Fittipaldi; Roberto A Steiner; Michio Matsushita; Bauke W Dijkstra; Edgar J J Groenen; Martina Huber
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

Review 2.  Ring-cleaving dioxygenases with a cupin fold.

Authors:  Susanne Fetzner
Journal:  Appl Environ Microbiol       Date:  2012-01-27       Impact factor: 4.792

3.  Anaerobic enzyme.substrate structures provide insight into the reaction mechanism of the copper-dependent quercetin 2,3-dioxygenase.

Authors:  Roberto A Steiner; Kor H Kalk; Bauke W Dijkstra
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

Review 4.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
Journal:  Chem Rev       Date:  2014-03-03       Impact factor: 60.622

Review 5.  Emergence of metal selectivity and promiscuity in metalloenzymes.

Authors:  Hyunuk Eom; Woon Ju Song
Journal:  J Biol Inorg Chem       Date:  2019-05-21       Impact factor: 3.358

6.  Electron paramagnetic resonance spectroscopic study of copper hopping in doped bis(L-histidinato)cadmium dihydrate.

Authors:  Michael J Colaneri; Jacqueline Vitali; Kristin Kirschbaum
Journal:  J Phys Chem A       Date:  2013-04-12       Impact factor: 2.781

7.  O2-dependent aliphatic carbon-carbon bond cleavage reactivity in a Ni(II) enolate complex having a hydrogen bond donor microenvironment; comparison with a hydrophobic analogue.

Authors:  Katarzyna Grubel; Amy L Fuller; Bonnie M Chambers; Atta M Arif; Lisa M Berreau
Journal:  Inorg Chem       Date:  2010-02-01       Impact factor: 5.165

8.  Nickel quercetinase, a "promiscuous" metalloenzyme: metal incorporation and metal ligand substitution studies.

Authors:  Dimitrios Nianios; Sven Thierbach; Lenz Steimer; Pavel Lulchev; Dagmar Klostermeier; Susanne Fetzner
Journal:  BMC Biochem       Date:  2015-04-23       Impact factor: 4.059

Review 9.  Structure and function of atypically coordinated enzymatic mononuclear non-heme-Fe(II) centers.

Authors:  Daniela Buongiorno; Grit D Straganz
Journal:  Coord Chem Rev       Date:  2013-01-15       Impact factor: 22.315

10.  Characterization of Cu(II)-ACC complexes and conversion of the bound ACC into ethylene in the presence of hydrogen peroxide. detection of a brown intermediate at low temperature.

Authors:  Wadih Ghattas; Michel Giorgi; Christian Gaudin; Antal Rockenbauer; Marius Réglier; A Jalila Simaan
Journal:  Bioinorg Chem Appl       Date:  2007       Impact factor: 7.778

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