Literature DB >> 12071730

Fapy.dG instructs Klenow exo(-) to misincorporate deoxyadenosine.

Carissa J Wiederholt1, Marc M Greenberg.   

Abstract

The effects of Fapy.dG (N-(2-deoxy-alpha,beta-d-erythropentofuranosyl)-N-(2,6-diamino-4-hydroxy-5-formamidopyrimidine)) on the activity of Klenow exo- have been determined by using oligonucleotide substrates containing the lesion at a defined site. Fapy.dG inhibits primer polymerization at two positions: nucleotide incorporation opposite the lesion and extension one nucleotide past the lesion. Klenow exo- is inhibited less by Fapy.dG than by its analogue, MeFapy.dG. Fapy.dG instructs the polymerase to misincorporate deoxyadenosine opposite itself 20 times more frequently than does dG. Extension of the primer containing the Fapy.dG:dA base pair is only slightly less efficient than when dC is opposite the lesion. Overall, Fapy.dG increases the probability that Klenow exo- will make a mistake during replication approximately 80-million fold compared to a template containing the native nucleotide, dG.

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Year:  2002        PMID: 12071730     DOI: 10.1021/ja026522r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  32 in total

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Review 7.  An overview of chemical processes that damage cellular DNA: spontaneous hydrolysis, alkylation, and reactions with radicals.

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Journal:  Chem Res Toxicol       Date:  2009-11       Impact factor: 3.739

8.  Effect of N7-methylation on base pairing patterns of guanine: a DFT study.

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Journal:  J Mol Model       Date:  2021-05-25       Impact factor: 1.810

9.  Biomarkers of oxidatively induced DNA damage in dreissenid mussels: A genotoxicity assessment tool for the Laurentian Great Lakes.

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10.  Efficient removal of formamidopyrimidines by 8-oxoguanine glycosylases.

Authors:  Nirmala Krishnamurthy; Kazuhiro Haraguchi; Marc M Greenberg; Sheila S David
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