Literature DB >> 12068922

Molecular and cytogenetic analysis of the telomeric (TTAGGG)n repetitive sequences in the Nile tilapia, Oreochromis niloticus (Teleostei: Cichlidae).

Joyce S K Chew1, Claudio Oliveira, Jonathan M Wright, Melanie J Dobson.   

Abstract

The majority of chromosomes in Oreochromis niloticus, as with most fish karyotyped to date, cannot be individually identified owing to their small size. As a first step in establishing a physical map for this important aquaculture species of tilapia we have analyzed the location of the vertebrate telomeric repeat sequence, (TTAGGG)n, in O. niloticus. Southern blot hybridization analysis and a Bal31 sensitivity assay confirm that the vertebrate telomeric repeat is indeed present at O. niloticus chromosomal ends with repeat tracts extending for 4-10 kb on chromosomal ends in erythrocytes. Fluorescent in situ hybridization revealed that (TTAGGG)n is found not only at telomeres, but also at two interstitial loci on chromosome 1. These data support the hypothesis that chromosome 1, which is significantly larger than all the other chromosomes in the karyotype, was produced by the fusion of three chromosomes and explain the overall reduction of chromosomal number from the ancestral teleost karyotype of 2n=48 to 2n=44 observed in tilapia.

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Year:  2002        PMID: 12068922     DOI: 10.1007/s00412-002-0187-3

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  17 in total

1.  Transposable elements as a potential source for understanding the fish genome.

Authors:  Daniela Cristina Ferreira; Fabio Porto-Foresti; Claudio Oliveira; Fausto Foresti
Journal:  Mob Genet Elements       Date:  2011-07-01

2.  Genomic organization of repetitive DNAs in the cichlid fish Astronotus ocellatus.

Authors:  Juliana Mazzuchelli; Cesar Martins
Journal:  Genetica       Date:  2008-12-27       Impact factor: 1.082

3.  Chromosome evolution in African cichlid fish: contributions from the physical mapping of repeated DNAs.

Authors:  I A Ferreira; A B Poletto; T D Kocher; J C Mota-Velasco; D J Penman; C Martins
Journal:  Cytogenet Genome Res       Date:  2010-07-06       Impact factor: 1.636

4.  Chromosome differentiation patterns during cichlid fish evolution.

Authors:  Andréia B Poletto; Irani A Ferreira; Diogo C Cabral-de-Mello; Rafael T Nakajima; Juliana Mazzuchelli; Heraldo B Ribeiro; Paulo C Venere; Mauro Nirchio; Thomas D Kocher; Cesar Martins
Journal:  BMC Genet       Date:  2010-06-15       Impact factor: 2.797

5.  Chromosome spreading of associated transposable elements and ribosomal DNA in the fish Erythrinus erythrinus. Implications for genome change and karyoevolution in fish.

Authors:  Marcelo B Cioffi; Cesar Martins; Luiz A C Bertollo
Journal:  BMC Evol Biol       Date:  2010-09-06       Impact factor: 3.260

6.  Identification of repetitive elements in the genome of Oreochromis niloticus: tilapia repeat masker.

Authors:  Andrey Shirak; Manfred Grabherr; Federica Di Palma; Kerstin Lindblad-Toh; Gideon Hulata; Micha Ron; Tom D Kocher; Eyal Seroussi
Journal:  Mar Biotechnol (NY)       Date:  2009-11-21       Impact factor: 3.619

7.  Comparative cytogenetics of cichlid fishes through genomic in-situ hybridization (GISH) with emphasis on Oreochromis niloticus.

Authors:  Guilherme Targino Valente; Carlos Henrique Schneider; Maria Claudia Gross; Eliana Feldberg; Cesar Martins
Journal:  Chromosome Res       Date:  2009-08-15       Impact factor: 5.239

8.  A high-resolution map of the Nile tilapia genome: a resource for studying cichlids and other percomorphs.

Authors:  Richard Guyon; Michaelle Rakotomanga; Naoual Azzouzi; Jean Pierre Coutanceau; Celine Bonillo; Helena D'Cotta; Elodie Pepey; Lucile Soler; Marguerite Rodier-Goud; Angelique D'Hont; Matthew A Conte; Nikkie E M van Bers; David J Penman; Christophe Hitte; Richard P M A Crooijmans; Thomas D Kocher; Catherine Ozouf-Costaz; Jean Francois Baroiller; Francis Galibert
Journal:  BMC Genomics       Date:  2012-06-06       Impact factor: 3.969

9.  Integrating cytogenetics and genomics in comparative evolutionary studies of cichlid fish.

Authors:  Juliana Mazzuchelli; Thomas David Kocher; Fengtang Yang; Cesar Martins
Journal:  BMC Genomics       Date:  2012-09-09       Impact factor: 3.969

10.  A microsatellite-based linkage map of salt tolerant tilapia (Oreochromis mossambicus x Oreochromis spp.) and mapping of sex-determining loci.

Authors:  Feng Liu; Fei Sun; Jian Li; Jun Hong Xia; Grace Lin; Rong Jian Tu; Gen Hua Yue
Journal:  BMC Genomics       Date:  2013-01-28       Impact factor: 3.969

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