Literature DB >> 12060704

SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness.

Bethany Yeiser1, Evan D Pepper, Myron F Goodman, Steven E Finkel.   

Abstract

Escherichia coli encodes three SOS-induced DNA polymerases: pol II, pol IV, and pol V. We show here that each of these polymerases confers a competitive fitness advantage during the stationary phase of the bacterial life cycle, in the absence of external DNA-damaging agents known to induce the SOS response. When grown individually, wild-type and SOS pol mutants exhibit indistinguishable temporal growth and death patterns. In contrast, when grown in competition with wild-type E. coli, mutants lacking one or more SOS polymerase suffer a severe reduction in fitness. These mutants also fail to express the "growth advantage in stationary phase" phenotype as do wild-type strains, instead expressing two additional new types of "growth advantage in stationary phase" phenotype. These polymerases contribute to survival by providing essential functions to ensure replication of the chromosome and by generating genetic diversity.

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Year:  2002        PMID: 12060704      PMCID: PMC124368          DOI: 10.1073/pnas.092269199

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Replication restart in UV-irradiated Escherichia coli involving pols II, III, V, PriA, RecA and RecFOR proteins.

Authors:  Savithri Rangarajan; Roger Woodgate; Myron F Goodman
Journal:  Mol Microbiol       Date:  2002-02       Impact factor: 3.501

2.  The Y-family of DNA polymerases.

Authors:  H Ohmori; E C Friedberg; R P Fuchs; M F Goodman; F Hanaoka; D Hinkle; T A Kunkel; C W Lawrence; Z Livneh; T Nohmi; L Prakash; S Prakash; T Todo; G C Walker; Z Wang; R Woodgate
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

Review 3.  Error-prone repair DNA polymerases in prokaryotes and eukaryotes.

Authors:  Myron F Goodman
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

Review 4.  The biochemical basis and in vivo regulation of SOS-induced mutagenesis promoted by Escherichia coli DNA polymerase V (UmuD'2C).

Authors:  M F Goodman; R Woodgate
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2000

Review 5.  Adaptive mutation in Escherichia coli.

Authors:  P L Foster
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2000

6.  Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis.

Authors:  M Tang; P Pham; X Shen; J S Taylor; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

7.  The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication.

Authors:  N B Reuven; G Arad; A Maor-Shoshani; Z Livneh
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

8.  DNA polymerase II.

Authors:  R Knippers
Journal:  Nature       Date:  1970-12-12       Impact factor: 49.962

9.  The Escherichia coli SOS gene sbmC is regulated by H-NS and RpoS during the SOS induction and stationary growth phase.

Authors:  T J Oh; I L Jung; I G Kim
Journal:  Biochem Biophys Res Commun       Date:  2001-11-09       Impact factor: 3.575

10.  Efficiency and accuracy of SOS-induced DNA polymerases replicating benzo[a]pyrene-7,8-diol 9,10-epoxide A and G adducts.

Authors:  Xuan Shen; Jane M Sayer; Heiko Kroth; Ingrid Ponten; Mike O'Donnell; Roger Woodgate; Donald M Jerina; Myron F Goodman
Journal:  J Biol Chem       Date:  2001-12-04       Impact factor: 5.157

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  90 in total

Review 1.  DNA replication fidelity in Escherichia coli: a multi-DNA polymerase affair.

Authors:  Iwona J Fijalkowska; Roel M Schaaper; Piotr Jonczyk
Journal:  FEMS Microbiol Rev       Date:  2012-04-05       Impact factor: 16.408

2.  6S RNA function enhances long-term cell survival.

Authors:  Amy E Trotochaud; Karen M Wassarman
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

3.  Adaptive mutation in Escherichia coli.

Authors:  Patricia L Foster
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

4.  Genomic changes arising in long-term stab cultures of Escherichia coli.

Authors:  D Faure; R Frederick; D Włoch; P Portier; M Blot; J Adams
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

5.  General stress response regulator RpoS in adaptive mutation and amplification in Escherichia coli.

Authors:  Mary-Jane Lombardo; Ildiko Aponyi; Susan M Rosenberg
Journal:  Genetics       Date:  2004-02       Impact factor: 4.562

6.  Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli.

Authors:  Jill C Layton; Patricia L Foster
Journal:  Mol Microbiol       Date:  2003-10       Impact factor: 3.501

7.  RpoS, the stress response sigma factor, plays a dual role in the regulation of Escherichia coli's error-prone DNA polymerase IV.

Authors:  Kimberly A M Storvik; Patricia L Foster
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

8.  The SMC-like protein complex SbcCD enhances DNA polymerase IV-dependent spontaneous mutation in Escherichia coli.

Authors:  Kimberly A M Storvik; Patricia L Foster
Journal:  J Bacteriol       Date:  2010-12-03       Impact factor: 3.490

9.  Antibiotics and UV radiation induce competence for natural transformation in Legionella pneumophila.

Authors:  Xavier Charpentier; Elisabeth Kay; Dominique Schneider; Howard A Shuman
Journal:  J Bacteriol       Date:  2010-12-17       Impact factor: 3.490

10.  Intracellular d-Serine Accumulation Promotes Genetic Diversity via Modulated Induction of RecA in Enterohemorrhagic Escherichia coli.

Authors:  James P R Connolly; Andrew J Roe
Journal:  J Bacteriol       Date:  2016-11-18       Impact factor: 3.490

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