Literature DB >> 12059114

Approaches to the analysis of gene expression using mRNA: a technical overview.

John M S Bartlett1.   

Abstract

Messenger RNA is the blueprint for all proteins expressed within living systems. Therefore, the study of mRNA expression within normal and diseased tissues is central to our understanding of biological systems. However, blueprints, in themselves, perform no function unless they are used to produce the material for which they code. Spurious results may frequently result from poorly designed or inappropriate studies. This review seeks to highlight both the pitfalls and the promise of various approaches to the analysis of mRNA in different systems and to place these studies in the wider context of research approaches aimed at understanding the function of living systems. The various techniques for the analysis of mRNA are discussed, with particular reference to their potential uses and problems and relevant examples are cited from the literature. It is hoped that this overview of the uses of analytical approaches will allow both the novice researcher and the more experienced scientist to better structure research approaches.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12059114     DOI: 10.1385/MB:21:2:149

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.860


  34 in total

Review 1.  Long-distance DD-PCR and cDNA microarrays.

Authors:  R Jurecic; J W Belmont
Journal:  Curr Opin Microbiol       Date:  2000-06       Impact factor: 7.934

2.  eSAGE: managing and analysing data generated with serial analysis of gene expression (SAGE).

Authors:  E H Margulies; J W Innis
Journal:  Bioinformatics       Date:  2000-07       Impact factor: 6.937

3.  Analysis of similarity of electrophoretic patterns in mRNA differential display.

Authors:  T Aittokallio; P Ojala; T J Nevalainen; O Nevalainen
Journal:  Electrophoresis       Date:  2000-08       Impact factor: 3.535

4.  A quantitative method for evaluation of FGF family and FGF receptor family gene expression by RT-PCR.

Authors:  K Ozawa; M Seo; T Imamura
Journal:  Brain Res Brain Res Protoc       Date:  1997-08

5.  The importance of fixation procedures on DNA template and its suitability for solution-phase polymerase chain reaction and PCR in situ hybridization.

Authors:  J J O'Leary; G Browne; R J Landers; M Crowley; I B Healy; J T Street; A M Pollock; J Murphy; M I Johnson; F A Lewis
Journal:  Histochem J       Date:  1994-04

Review 6.  Identification and characterization of genes responsive to apoptosis: application of DNA chip technology and mRNA differential display.

Authors:  Y Sun
Journal:  Histol Histopathol       Date:  2000-10       Impact factor: 2.303

7.  Transforming growth factor-beta isoform expression in human ovarian tumours.

Authors:  J M Bartlett; S P Langdon; W N Scott; S B Love; E P Miller; D Katsaros; J F Smyth; W R Miller
Journal:  Eur J Cancer       Date:  1997-12       Impact factor: 9.162

8.  An improved method for semiquantification of gene amplification from archival material.

Authors:  M A Underwood; J M Bartlett; T G Cooke
Journal:  PCR Methods Appl       Date:  1994-12

9.  Expression monitoring by hybridization to high-density oligonucleotide arrays.

Authors:  D J Lockhart; H Dong; M C Byrne; M T Follettie; M V Gallo; M S Chee; M Mittmann; C Wang; M Kobayashi; H Horton; E L Brown
Journal:  Nat Biotechnol       Date:  1996-12       Impact factor: 54.908

10.  Detection and quantitation of circulating cancer cells in the peripheral blood of lung cancer patients.

Authors:  K Peck; Y P Sher; J Y Shih; S R Roffler; C W Wu; P C Yang
Journal:  Cancer Res       Date:  1998-07-01       Impact factor: 12.701

View more
  10 in total

Review 1.  Detection and quantification of gene expression in environmental bacteriology.

Authors:  Freddie H Sharkey; Ibrahim M Banat; Roger Marchant
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

2.  Simultaneous determination of multiple mRNA levels utilizing MALDI-TOF mass spectrometry and biotinylated dideoxynucleotides.

Authors:  Daniel Scott Duffield; Li Cai; Sobin Kim
Journal:  RNA       Date:  2010-04-21       Impact factor: 4.942

3.  REEP1 and REEP2 proteins are preferentially expressed in neuronal and neuronal-like exocytotic tissues.

Authors:  Carl M Hurt; Susann Björk; Vincent K Ho; Ralf Gilsbach; Lutz Hein; Timothy Angelotti
Journal:  Brain Res       Date:  2013-12-16       Impact factor: 3.252

4.  Expression of the hyp-1 gene in early stages of development of Hypericum perforatum L.

Authors:  Ján Kosuth; Zuzana Katkovcinová; Petra Olexová; Eva Cellárová
Journal:  Plant Cell Rep       Date:  2006-09-20       Impact factor: 4.570

5.  Analysis of region-specific changes in gene expression upon treatment with citalopram and desipramine reveals temporal dynamics in response to antidepressant drugs at the transcriptome level.

Authors:  Magdalena Gąska; Maciej Kuśmider; Joanna Solich; Agata Faron-Górecka; Małgorzata J Krawczyk; Krzysztof Kułakowski; Marta Dziedzicka-Wasylewska
Journal:  Psychopharmacology (Berl)       Date:  2012-05-01       Impact factor: 4.530

6.  Identification and localization of cell types that express endothelial and neuronal nitric oxide synthase in the rat nucleus tractus solitarii.

Authors:  L H Lin; O Taktakishvili; W T Talman
Journal:  Brain Res       Date:  2007-08-08       Impact factor: 3.252

7.  Estradiol increases Pet-1 and serotonin transporter mRNA in the midbrain raphe nuclei of ovariectomized rats.

Authors:  Heidi M Rivera; Denesa R Oberbeck; Bumsup Kwon; Thomas A Houpt; Lisa A Eckel
Journal:  Brain Res       Date:  2009-01-10       Impact factor: 3.252

8.  Expression and cell-specific localization of cholecystokinin receptors in rat lung.

Authors:  Bin Cong; Shu-Jin Li; Yi-Ling Ling; Yu-Xia Yao; Zhen-Yong Gu; Jun-Xia Wang; Hong-Yu You
Journal:  World J Gastroenterol       Date:  2003-06       Impact factor: 5.742

9.  Prevalence of endosalpingiosis and other benign gynecologic lesions.

Authors:  Jan Sunde; Morgan Wasickanin; Tiffany A Katz; Emily L Wickersham; D O Emilie Steed; Novae Simper
Journal:  PLoS One       Date:  2020-05-13       Impact factor: 3.240

10.  Modified Northern blot protocol for easy detection of mRNAs in total RNA using radiolabeled probes.

Authors:  Tao Yang; Mingdi Zhang; Nianhui Zhang
Journal:  BMC Genomics       Date:  2022-01-20       Impact factor: 3.969

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.