Literature DB >> 11038335

eSAGE: managing and analysing data generated with serial analysis of gene expression (SAGE).

E H Margulies1, J W Innis.   

Abstract

SUMMARY: eSAGE is a comprehensive set of software tools for managing and analysing data generated with Serial Analysis of Gene Expression (SAGE).

Mesh：

Year:  2000        PMID： 11038335     DOI： 10.1093/bioinformatics/16.7.650

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  16 in total

1.  Identification and prevention of a GC content bias in SAGE libraries.

Authors:  E H Margulies; S L Kardia; J W Innis
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

2.  A comparative molecular analysis of developing mouse forelimbs and hindlimbs using serial analysis of gene expression (SAGE).

Authors:  E H Margulies; S L Kardia; J W Innis
Journal:  Genome Res       Date:  2001-10       Impact factor: 9.043

3.  Differential expression of cytoskeletal genes in the cochlear nucleus.

Authors:  David R Friedland; Paul Popper; Rebecca Eernisse; Benjamin Ringger; Joseph A Cioffi
Journal:  Anat Rec A Discov Mol Cell Evol Biol       Date:  2006-04

4.  Potassium channel gene expression in the rat cochlear nucleus.

Authors:  David R Friedland; Rebecca Eernisse; Paul Popper
Journal:  Hear Res       Date:  2007-01-31       Impact factor: 3.208

5.  Transcriptome profiling of genes involved in neural tube closure during human embryonic development using long serial analysis of gene expression (long-SAGE).

Authors:  Deidre R Krupp; Pu-Ting Xu; Sophie Thomas; Andrew Dellinger; Heather C Etchevers; Michel Vekemans; John R Gilbert; Marcy C Speer; Allison E Ashley-Koch; Simon G Gregory
Journal:  Birth Defects Res A Clin Mol Teratol       Date:  2012-07-18

6.  Serial analysis of gene expression in sugarcane (Saccharum spp.) leaves revealed alternative C4 metabolism and putative antisense transcripts.

Authors:  Tercilio Calsa; Antonio Figueira
Journal:  Plant Mol Biol       Date:  2007-01-09       Impact factor: 4.076

7.  Expression of tight-junction protein claudin-7 is an early event in gastric tumorigenesis.

Authors:  Adam H Johnson; Henry F Frierson; Alexander Zaika; Steven M Powell; James Roche; Sheila Crowe; Christopher A Moskaluk; Wa'el El-Rifai
Journal:  Am J Pathol       Date:  2005-08       Impact factor: 4.307

8.  Gene expression profiles of epithelial cells microscopically isolated from a breast-invasive ductal carcinoma and a nodal metastasis.

Authors:  I Zucchi; E Mento; V A Kuznetsov; M Scotti; V Valsecchi; B Simionati; E Vicinanza; G Valle; S Pilotti; R Reinbold; P Vezzoni; A Albertini; R Dulbecco
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-17       Impact factor: 11.205

9.  A SAGE study of apolipoprotein E3/3, E3/4 and E4/4 allele-specific gene expression in hippocampus in Alzheimer disease.

Authors:  Pu-Ting Xu; Yi-Ju Li; Xue-Jun Qin; Charles Kroner; Anya Green-Odlum; Hong Xu; Tian-Yuan Wang; Donald E Schmechel; Christine M Hulette; John Ervin; Mike Hauser; Jonathan Haines; Margaret A Pericak-Vance; John R Gilbert
Journal:  Mol Cell Neurosci       Date:  2007-07-24       Impact factor: 4.314

10.  Clustering of molecular alterations in gastroesophageal carcinomas.

Authors:  Natalie Koon; Alexander Zaika; Christopher A Moskaluk; Henry F Frierson; Sakari Knuutila; Steven M Powell; Wa'el El-Rifai
Journal:  Neoplasia       Date:  2004 Mar-Apr       Impact factor: 5.715
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