Literature DB >> 12051897

The first three-dimensional structure of phosphofructokinase from Saccharomyces cerevisiae determined by electron microscopy of single particles.

T Ruiz1, G Kopperschläger, M Radermacher.   

Abstract

Phosphofructokinaseis a key regulatory enzyme of the glycolytic pathway. We have determined the structure of this enzyme from Saccharomyces cerevisiae to a resolution of 2.0 nm. This is the first structure available for this family of enzymes in eukaryotic organisms. Phosphofructokinase is an octamer composed of 4alpha and 4beta subunits arranged in a dihedral point group symmetry D(2). The enzyme has a very open and elongated structure, with dimensions of 24 nm in length and 17 nm in width. The final structure, calculated from 0 degrees tilt projections of the molecule at random orientations using as reference the volume obtained by the random conical reconstruction technique in ice, has allowed us to discern the shapes of the subunits and their mutual arrangement in the octamer. (c)2002 Elsevier Science (USA).

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Year:  2001        PMID: 12051897     DOI: 10.1006/jsbi.2002.4440

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  10 in total

1.  Automated acquisition of electron microscopic random conical tilt sets.

Authors:  Shawn Q Zheng; Justin M Kollman; Michael B Braunfeld; John W Sedat; David A Agard
Journal:  J Struct Biol       Date:  2006-11-03       Impact factor: 2.867

2.  Probabilistic principal component analysis with expectation maximization (PPCA-EM) facilitates volume classification and estimates the missing data.

Authors:  Lingbo Yu; Robert R Snapp; Teresa Ruiz; Michael Radermacher
Journal:  J Struct Biol       Date:  2010-04-10       Impact factor: 2.867

3.  Projection-based volume alignment.

Authors:  Lingbo Yu; Robert R Snapp; Teresa Ruiz; Michael Radermacher
Journal:  J Struct Biol       Date:  2013-02-11       Impact factor: 2.867

4.  The structure of the ATP-bound state of S. cerevisiae phosphofructokinase determined by cryo-electron microscopy.

Authors:  Montserrat Bárcena; Michael Radermacher; Jörg Bär; Gerhard Kopperschläger; Teresa Ruiz
Journal:  J Struct Biol       Date:  2007-03-31       Impact factor: 2.867

5.  Investigation of the three-dimensional architecture of the collagen adhesin EmaA of Aggregatibacter actinomycetemcomitans by electron tomography.

Authors:  Chunxiao Yu; Keith P Mintz; Teresa Ruiz
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490

6.  Direct localization of the 51 and 24 kDa subunits of mitochondrial complex I by three-dimensional difference imaging.

Authors:  Todd Clason; Volker Zickermann; Teresa Ruiz; Ulrich Brandt; Michael Radermacher
Journal:  J Struct Biol       Date:  2007-05-17       Impact factor: 2.867

7.  The structure of eukaryotic and prokaryotic complex I.

Authors:  T Clason; T Ruiz; H Schägger; G Peng; V Zickermann; U Brandt; H Michel; M Radermacher
Journal:  J Struct Biol       Date:  2009-09-02       Impact factor: 2.867

8.  Structures of S. pombe phosphofructokinase in the F6P-bound and ATP-bound states.

Authors:  Shaun Benjamin; Michael Radermacher; Jörg Bär; Anke Edelmann; Teresa Ruiz
Journal:  J Struct Biol       Date:  2007-06-15       Impact factor: 2.867

9.  3D structure of phosphofructokinase from Pichia pastoris: Localization of the novel gamma-subunits.

Authors:  Shaun Benjamin; Michael Radermacher; Jürgen Kirchberger; Torsten Schöneberg; Anke Edelmann; Teresa Ruiz
Journal:  J Struct Biol       Date:  2009-06-25       Impact factor: 2.867

10.  Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy.

Authors:  Richard Henderson; Shaoxia Chen; James Z Chen; Nikolaus Grigorieff; Lori A Passmore; Luciano Ciccarelli; John L Rubinstein; R Anthony Crowther; Phoebe L Stewart; Peter B Rosenthal
Journal:  J Mol Biol       Date:  2011-09-12       Impact factor: 5.469

  10 in total

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