Literature DB >> 12049626

Calcium-binding parameter of Bacillus amyloliquefaciens alpha-amylase determined by inactivation kinetics.

Atsushi Tanaka1, Eiichi Hoshino.   

Abstract

The irreversible thermal inactivation and the thermodynamics of calcium ion binding of Bacillus amyloliquefaciens alpha-amylase in the absence of substrates were studied. The enzyme inactivation on heating was apparently followed by first-order kinetics. The enzyme was stabilized with an increased concentration of calcium ion and thus the inactivation was highly dependent on the state of calcium binding. The activation parameter for the inactivation suggests an unfolding of the enzyme protein upon heating. Values of both the activation enthalpy and entropy were increased with a higher calcium ion concentration. An inactivation kinetic model is based on the assumption of a two-stage unfolding transition in which the bivalent ion dissociation occurs in the first step followed by the secondary structural unfolding. This simple kinetic model provides both a qualitative and quantitative interpretation of calcium ion binding to the enzyme and its effect on the inactivation properties. The specific approximations of the kinetic model were strictly followed in the analysis to calculate the apparent inactivation rate at each calcium ion concentration in terms of the calcium-binding parameters. The enthalpy and entropy changes for the calcium ion binding were calculated to be -149 kJ/mol and -360 J.mol(-1).K(-1) respectively and these values suggest a strong enthalpic affinity for the bivalent ion binding to the enzyme protein. The thermodynamical interpretation attempts to provide clear relations between the terms of an apparent inactivation rate and the calcium binding.

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Year:  2002        PMID: 12049626      PMCID: PMC1222611          DOI: 10.1042/BJ20011436

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  22 in total

1.  Thermodynamic changes in the binding of Ca2+ to a mutant human lysozyme (D86/92). Enthalpy-entropy compensation observed upon Ca2+ binding to proteins.

Authors:  R Kuroki; K Nitta; K Yutani
Journal:  J Biol Chem       Date:  1992-12-05       Impact factor: 5.157

2.  Entropic stabilization of a mutant human lysozyme induced by calcium binding.

Authors:  R Kuroki; S Kawakita; H Nakamura; K Yutani
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-01       Impact factor: 11.205

3.  The calcium requirement for stability and enzymatic activity of two isoforms of barley aleurone alpha-amylase.

Authors:  D S Bush; L Sticher; R van Huystee; D Wagner; R L Jones
Journal:  J Biol Chem       Date:  1989-11-15       Impact factor: 5.157

4.  Alpha-amylase structure and activity.

Authors:  E A MacGregor
Journal:  J Protein Chem       Date:  1988-08

5.  Calcium binding in alpha-amylases: an X-ray diffraction study at 2.1-A resolution of two enzymes from Aspergillus.

Authors:  E Boel; L Brady; A M Brzozowski; Z Derewenda; G G Dodson; V J Jensen; S B Petersen; H Swift; L Thim; H F Woldike
Journal:  Biochemistry       Date:  1990-07-03       Impact factor: 3.162

6.  Amino acid residues stabilizing a Bacillus alpha-amylase against irreversible thermoinactivation.

Authors:  Y Suzuki; N Ito; T Yuuki; H Yamagata; S Udaka
Journal:  J Biol Chem       Date:  1989-11-15       Impact factor: 5.157

7.  Crystallization and preliminary crystallographic study of bacterial alpha-amylases.

Authors:  A Suzuki; T Yamane; Y Ito; T Nishio; H Fujiwara; T Ashida
Journal:  J Biochem       Date:  1990-09       Impact factor: 3.387

8.  Mechanisms of irreversible thermal inactivation of Bacillus alpha-amylases.

Authors:  S J Tomazic; A M Klibanov
Journal:  J Biol Chem       Date:  1988-03-05       Impact factor: 5.157

9.  Metal binding characteristics of human salivary and porcine pancreatic amylase.

Authors:  R P Agarwal; R I Henkin
Journal:  J Biol Chem       Date:  1987-02-25       Impact factor: 5.157

10.  Three dimensional structure of porcine pancreatic alpha-amylase at 2.9 A resolution. Role of calcium in structure and activity.

Authors:  G Buisson; E Duée; R Haser; F Payan
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

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  3 in total

1.  Effect of calcium ions on the irreversible denaturation of a recombinant Bacillus halmapalus alpha-amylase: a calorimetric investigation.

Authors:  Anders D Nielsen; Claus C Fuglsang; Peter Westh
Journal:  Biochem J       Date:  2003-07-15       Impact factor: 3.857

2.  Extra EF hand unit (DX) mediated stabilization and calcium independency of α-amylase.

Authors:  Leila Sadeghi; Khosro Khajeh; Nasrin Mollania; Bahareh Dabirmanesh; Bijan Ranjbar
Journal:  Mol Biotechnol       Date:  2013-03       Impact factor: 2.695

3.  Streptomyces misionensis PESB-25 produces a thermoacidophilic endoglucanase using sugarcane bagasse and corn steep liquor as the sole organic substrates.

Authors:  Marcella Novaes Franco-Cirigliano; Raquel de Carvalho Rezende; Mônica Pires Gravina-Oliveira; Pedro Henrique Freitas Pereira; Rodrigo Pires do Nascimento; Elba Pinto da Silva Bon; Andrew Macrae; Rosalie Reed Rodrigues Coelho
Journal:  Biomed Res Int       Date:  2013-03-24       Impact factor: 3.411

  3 in total

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