Literature DB >> 12047936

Antisense RNAs everywhere?

E Gerhart H Wagner, Klas Flärdh.   

Abstract

In recent years, systematic searches of both prokaryote and eukaryote genomes have identified a staggering number of small RNAs, the biological functions of which remain unknown. Small RNA-based regulators are well known from bacterial plasmids. They act on target RNAs by sequence complementarity; that is, they are antisense RNAs. Recent findings suggest that many of the novel orphan RNAs encoded by bacterial and eukaryotic chromosomes might also belong to a ubiquitous, heterogeneous class of antisense regulators of gene expression.

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Year:  2002        PMID： 12047936     DOI： 10.1016/s0168-9525(02)02658-6

Source DB:  PubMed          Journal:  Trends Genet        ISSN： 0168-9525            Impact factor:   11.639


  32 in total

1.  Genome-wide antisense transcription drives mRNA processing in bacteria.

Authors:  Iñigo Lasa; Alejandro Toledo-Arana; Alexander Dobin; Maite Villanueva; Igor Ruiz de los Mozos; Marta Vergara-Irigaray; Víctor Segura; Delphine Fagegaltier; José R Penadés; Jaione Valle; Cristina Solano; Thomas R Gingeras
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-28       Impact factor: 11.205

2.  New construct approaches for efficient gene silencing in plants.

Authors:  Hua Yan; Robert Chretien; Jingsong Ye; Caius M Rommens
Journal:  Plant Physiol       Date:  2006-06-09       Impact factor: 8.340

Review 3.  Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms.

Authors:  Michal Lapidot; Yitzhak Pilpel
Journal:  EMBO Rep       Date:  2006-12       Impact factor: 8.807

4.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

5.  Kill the messenger: bacterial antisense RNA promotes mRNA decay.

Authors:  E Gerhart H Wagner
Journal:  Nat Struct Mol Biol       Date:  2009-08       Impact factor: 15.369

6.  The small RNA GcvB regulates sstT mRNA expression in Escherichia coli.

Authors:  Sarah C Pulvermacher; Lorraine T Stauffer; George V Stauffer
Journal:  J Bacteriol       Date:  2008-10-24       Impact factor: 3.490

7.  Glycosyl phosphatidylinositol-anchored proteins in chemosensory signaling: antisense manipulation of Paramecium tetraurelia PIG-A gene expression.

Authors:  Junji Yano; Villa Rachochy; Judith L Van Houten
Journal:  Eukaryot Cell       Date:  2003-12

8.  Transcriptional and post-transcriptional regulation of the Escherichia coli luxS mRNA; involvement of the sRNA MicA.

Authors:  Klas I Udekwu
Journal:  PLoS One       Date:  2010-10-18       Impact factor: 3.240

9.  Conditional gene silencing of multiple genes with antisense RNAs and generation of a mutator strain of Escherichia coli.

Authors:  Nobutaka Nakashima; Tomohiro Tamura
Journal:  Nucleic Acids Res       Date:  2009-06-10       Impact factor: 16.971

10.  Fast prediction of RNA-RNA interaction.

Authors:  Raheleh Salari; Rolf Backofen; S Cenk Sahinalp
Journal:  Algorithms Mol Biol       Date:  2010-01-04       Impact factor: 1.405
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