Literature DB >> 12029040

Expression system for high levels of GAG lyase gene expression and study of the hepA upstream region in Flavobacterium heparinum.

Françoise Blain1, A Lydia Tkalec, Zhongqi Shao, Catherine Poulin, Marc Pedneault, Kangfu Gu, Bernhard Eggimann, Joe Zimmermann, Hongsheng Su.   

Abstract

A system for high-level expression of heparinase I, heparinase II, heparinase III, chondroitinase AC, and chondroitinase B in Flavobacterium heparinum is described. hepA, along with its regulatory region, as well as hepB, hepC, cslA, and cslB, cloned downstream of the hepA regulatory region, was integrated in the chromosome to yield stable transconjugant strains. The level of heparinase I and II expression from the transconjugant strains was approximately fivefold higher, while heparinase III expression was 10-fold higher than in wild-type F. heparinum grown in heparin-only medium. The chondroitinase AC and B transconjugant strains, grown in heparin-only medium, yielded 20- and 13-fold increases, respectively, in chondroitinase AC and B expression, compared to wild-type F. heparinum grown in chondroitin sulfate A-only medium. The hepA upstream region was also studied using cslA as a reporter gene, and the transcriptional start site was determined to be 26 bp upstream of the start codon in the chondroitinase AC transconjugant strain. The transcriptional start sites were determined for hepA in both the wild-type F. heparinum and heparinase I transconjugant strains and were shown to be the same as in the chondroitinase AC transconjugant strain. The five GAG lyases were purified from these transconjugant strains and shown to be identical to their wild-type counterparts.

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Year:  2002        PMID: 12029040      PMCID: PMC135102          DOI: 10.1128/JB.184.12.3242-3252.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  34 in total

1.  Crystallization and preliminary X-ray analysis of chondroitinase B from Flavobacterium heparinum.

Authors:  Y Li; A Matte; H Su; M Cygler
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-05

2.  Specific plate assay for bacterial heparinase.

Authors:  J J Zimmermann; R Langer; C L Cooney
Journal:  Appl Environ Microbiol       Date:  1990-11       Impact factor: 4.792

Review 3.  Proteoglycans: structures and interactions.

Authors:  L Kjellén; U Lindahl
Journal:  Annu Rev Biochem       Date:  1991       Impact factor: 23.643

4.  Heparinase II from Flavobacterium heparinum. Role of histidine residues in enzymatic activity as probed by chemical modification and site-directed mutagenesis.

Authors:  Z Shriver; Y Hu; R Sasisekharan
Journal:  J Biol Chem       Date:  1998-04-24       Impact factor: 5.157

5.  Biochemical investigations and mapping of the calcium-binding sites of heparinase I from Flavobacterium heparinum.

Authors:  Z Shriver; D Liu; Y Hu; R Sasisekharan
Journal:  J Biol Chem       Date:  1999-02-12       Impact factor: 5.157

6.  Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov.

Authors:  P L Steyn; P Segers; M Vancanneyt; P Sandra; K Kersters; J J Joubert
Journal:  Int J Syst Bacteriol       Date:  1998-01

7.  Crystal structure of chondroitin AC lyase, a representative of a family of glycosaminoglycan degrading enzymes.

Authors:  J Féthière; B Eggimann; M Cygler
Journal:  J Mol Biol       Date:  1999-05-14       Impact factor: 5.469

8.  Purification and characterization of heparin lyases from Flavobacterium heparinum.

Authors:  D L Lohse; R J Linhardt
Journal:  J Biol Chem       Date:  1992-12-05       Impact factor: 5.157

9.  Heparinase production by Flavobacterium heparinum.

Authors:  P M Galliher; C L Cooney; R Langer; R J Linhardt
Journal:  Appl Environ Microbiol       Date:  1981-02       Impact factor: 4.792

10.  Purification and characterization of heparinase from Flavobacterium heparinum.

Authors:  V C Yang; R J Linhardt; H Bernstein; C L Cooney; R Langer
Journal:  J Biol Chem       Date:  1985-02-10       Impact factor: 5.157

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  5 in total

Review 1.  CS lyases: structure, activity, and applications in analysis and the treatment of diseases.

Authors:  Robert J Linhardt; Fikri Y Avci; Toshihiko Toida; Yeong Shik Kim; Miroslaw Cygler
Journal:  Adv Pharmacol       Date:  2006

2.  Characterization of strong promoters from an environmental Flavobacterium hibernum strain by using a green fluorescent protein-based reporter system.

Authors:  S Chen; M Bagdasarian; M G Kaufman; E D Walker
Journal:  Appl Environ Microbiol       Date:  2006-12-22       Impact factor: 4.792

3.  Mutational analysis of the ompA promoter from Flavobacterium johnsoniae.

Authors:  Shicheng Chen; Michael Bagdasarian; Michael G Kaufman; Adam K Bates; Edward D Walker
Journal:  J Bacteriol       Date:  2007-05-04       Impact factor: 3.490

4.  Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3).

Authors:  Cliff Han; Stefan Spring; Alla Lapidus; Tijana Glavina Del Rio; Hope Tice; Alex Copeland; Jan-Fang Cheng; Susan Lucas; Feng Chen; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia C Jeffries; Elizabeth Saunders; Olga Chertkov; Thomas Brettin; Markus Göker; Manfred Rohde; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; John C Detter
Journal:  Stand Genomic Sci       Date:  2009-07-20

Review 5.  A broader view: microbial enzymes and their relevance in industries, medicine, and beyond.

Authors:  Neelam Gurung; Sumanta Ray; Sutapa Bose; Vivek Rai
Journal:  Biomed Res Int       Date:  2013-09-11       Impact factor: 3.411

  5 in total

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