Literature DB >> 11999376

Comparative analysis of the plant mRNA-destabilizing element, DST, in mammalian and tobacco cells.

M Feldbrügge1, P Arizti, M L Sullivan, P D Zamore, J G Belasco, P J Green.   

Abstract

The labile SAUR transcripts from higher plants contain a conserved DST sequence in their 3'-untranslated regions. Two copies of a DST sequence from soybean are sufficient to destabilize reporter transcripts in cultured tobacco cells whereas variants bearing mutations in the conserved ATAGAT or GTA regions are inactive. To investigate the potential for conserved recognition components in mammalian and plant cells, we examined the function of this instability determinant in mouse NIH3T3 fibroblasts and tobacco BY2 cells. In fibroblasts, a tetrameric DST element from soybean accelerated deadenylation and decay of a reporter transcript. However, a version mutated in the ATAGAT region was equally effective in this regard, and a tetrameric DST element from Arabidopsis was inactive. In contrast, the soybean DST element was more active as an mRNA instability element than the mutant version and the Arabidopsis element, when tested as tetramers in tobacco cells. Hence, the plant DST element is not recognized in animal cells with the same sequence requirements as in plant cells. Therefore, its mode of recognition appears to be plant-specific.

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Year:  2002        PMID: 11999376     DOI: 10.1023/a:1014936824187

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  46 in total

1.  Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay.

Authors:  A B Shyu; J G Belasco; M E Greenberg
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2.  Mutational analysis of the DST element in tobacco cells and transgenic plants: identification of residues critical for mRNA instability.

Authors:  M L Sullivan; P J Green
Journal:  RNA       Date:  1996-04       Impact factor: 4.942

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Authors:  A Jacobson; S W Peltz
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

4.  The Elav-like proteins bind to AU-rich elements and to the poly(A) tail of mRNA.

Authors:  W J Ma; S Chung; H Furneaux
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5.  The SV40 enhancer is composed of multiple functional elements that can compensate for one another.

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Journal:  Cell       Date:  1986-05-09       Impact factor: 41.582

6.  DST sequences, highly conserved among plant SAUR genes, target reporter transcripts for rapid decay in tobacco.

Authors:  T C Newman; M Ohme-Takagi; C B Taylor; P J Green
Journal:  Plant Cell       Date:  1993-06       Impact factor: 11.277

7.  AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: the functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A).

Authors:  C A Lagnado; C Y Brown; G J Goodall
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

8.  The PUMILIO-RNA interaction: a single RNA-binding domain monomer recognizes a bipartite target sequence.

Authors:  P D Zamore; D P Bartel; R Lehmann; J R Williamson
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Authors:  P Gil; Y Liu; V Orbović; E Verkamp; K L Poff; P J Green
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Authors:  C Kuhlemeier; R Fluhr; P J Green; N H Chua
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Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-07       Impact factor: 11.205

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Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

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8.  In silicio expression analysis of PKS genes isolated from Cannabis sativa L.

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10.  Expression and functional analysis of CsA-IPT5 splice variants during shoot branching in Camellia sinensis.

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  10 in total

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