Literature DB >> 11991940

Search and retrieve. Large-scale data generation is becoming increasingly important in biological research. But how good are the tools to make sense of the data?

Alfonso Valencia1.   

Abstract

Mesh：

Year:  2002        PMID： 11991940      PMCID： PMC1084117          DOI： 10.1093/embo-reports/kvf104

Source DB:  PubMed          Journal:  EMBO Rep        ISSN： 1469-221X            Impact factor:   8.807


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  16 in total

1.  Automated genome sequence analysis and annotation.

Authors:  M A Andrade; N P Brown; C Leroy; S Hoersch; A de Daruvar; C Reich; A Franchini; J Tamames; A Valencia; C Ouzounis; C Sander
Journal:  Bioinformatics       Date:  1999-05       Impact factor: 6.937

2.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 3.  XML, bioinformatics and data integration.

Authors:  F Achard; G Vaysseix; E Barillot
Journal:  Bioinformatics       Date:  2001-02       Impact factor: 6.937

4.  Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.

Authors:  A Brazma; P Hingamp; J Quackenbush; G Sherlock; P Spellman; C Stoeckert; J Aach; W Ansorge; C A Ball; H C Causton; T Gaasterland; P Glenisson; F C Holstege; I F Kim; V Markowitz; J C Matese; H Parkinson; A Robinson; U Sarkans; S Schulze-Kremer; J Stewart; R Taylor; J Vilo; M Vingron
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

5.  Mining the bibliome: searching for a needle in a haystack? New computing tools are needed to effectively scan the growing amount of scientific literature for useful information.

Authors:  Les Grivell
Journal:  EMBO Rep       Date:  2002-03       Impact factor: 8.807

6.  Intrinsic errors in genome annotation.

Authors:  D Devos; A Valencia
Journal:  Trends Genet       Date:  2001-08       Impact factor: 11.639

7.  The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

Authors:  A Bairoch; R Apweiler
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

8.  The EBI SRS server--recent developments.

Authors:  Evgeni M Zdobnov; Rodrigo Lopez; Rolf Apweiler; Thure Etzold
Journal:  Bioinformatics       Date:  2002-02       Impact factor: 6.937

9.  Database verification studies of SWISS-PROT and GenBank.

Authors:  P D Karp; S Paley; J Zhu
Journal:  Bioinformatics       Date:  2001-06       Impact factor: 6.937

10.  Can bibliographic pointers for known biological data be found automatically? Protein interactions as a case study.

Authors:  C Blaschke; A Valencia
Journal:  Comp Funct Genomics       Date:  2001
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  2 in total

1.  Informatics and hypothesis-driven research.

Authors:  Neil R Smalheiser
Journal:  EMBO Rep       Date:  2002-08       Impact factor: 8.807

Review 2.  Calling International Rescue: knowledge lost in literature and data landslide!

Authors:  Teresa K Attwood; Douglas B Kell; Philip McDermott; James Marsh; Steve R Pettifer; David Thorne
Journal:  Biochem J       Date:  2009-12-10       Impact factor: 3.857
  2 in total

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